Multiplexed high-content assay for toxicity profiling using live iPSC-derived cardiomyocyte lines with lineage-specific barcoding
Multiplexed high-content assay for toxicity profiling using live iPSC-derived cardiomyocyte lines with lineage-specific barcoding
批准号:
9761607
负责人:
Mary Ludlam
金额:
$82.16万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2018
资助国家:
美国
项目状态:
已结题
起止时间:
2018-08-15 至 2020-10-31
关键词:
AddressBiological AssayCRISPR/Cas technologyCardiacCardiac MyocytesCardiotoxicityCell LineCell LineageCellsCellular AssayCellular StructuresChemicalsClassificationContractsDataDevelopmentDrug ModelingsDrug toxicityEffectivenessEuropeEvaluationFoundationsGenerationsGoalsGovernment AgenciesHealth BenefitHeart AtriumHumanIn VitroIndustry StandardMachine LearningMedicineMethodsMicroscopyMitochondriaNodalNuclearPathway interactionsPatientsPharmaceutical PreparationsPharmacologic SubstancePhasePhenotypePhysiologicalPopulation HeterogeneityPositioning AttributePublic HealthReagentReporterReportingResearchSafetySarcomeresSiteSmall Business Innovation Research GrantSpecificitySpeedStructureTestingTimeToxic effectToxicity TestsToxicologyTrainingTreatment-Related CancerValidationVentricularWithdrawalWorkbasecell immortalizationclinical candidateclinical predictorscostcost effectivedrug discoverydrug testingenvironmental chemicalexpression vectorgenome editinghigh throughput screeningimmortalized cellimprovedinduced pluripotent stem cellinnovationinnovative technologiesmachine learning algorithmmodel developmentnew technologynovelnovel strategiesphase I trialpre-clinicalpredictive modelingpredictive testpredictive toolsprogramsresponsesafety assessmentscreeningsite-specific integrationsuccesstherapeutic developmenttherapeutic evaluationtool
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Project Summary/Abstract
Human induced pluripotent stem cells (hiPSCs) are poised to transform toxicological evaluation, however new
approaches to enable their functional and structural profiling are needed to improve the utility of hiPSC -based
models for predictive and mechanistic toxicology screening. This need is addressed by our project’s Specific
Aims that encompass (1) development of a novel platform for generation of hiPSC-derived reporter cells; (2)
generation of a panel of multicolor hiPSC-derived cardiomyocytes (hiPSC-CMs) with stable lineage specific
fluorescent reporters; and (3) implementation and validation of a pilot machine learning-enabled predictive
cardiotoxicity screen using these tools. The proposed tools are configured to be extensible to other toxicology-
relevant pathways and phenotypes making it uniquely positioned to capitalize on the growing commercial need
for high-throughput predictive toxicology assays. The project deliverables benefit public health by improving the
ability to rapidly identify liabilities in specific cardiomyocyte lineage types, thus reducing the time and cost to
pinpoint cardiotoxicity of pharmaceutical and environmental chemicals.
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