Continued Development and Maintenance of the UltraScan Software
Continued Development and Maintenance of the UltraScan Software
批准号:
9973635
负责人:
Emre H. Brookes
金额:
$29.31万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2016
资助国家:
美国
项目状态:
已结题
起止时间:
2016-08-01 至 2024-07-31
关键词:
APBA1 geneAddressAgingAlgorithmsAnisotropyAntineoplastic AgentsArchitectureAustraliaBiochemistryBiomedical ResearchBiophysicsBiopolymersCRISPR/Cas technologyCanadaCellular biologyCodeCollaborationsCommunitiesComplexComputer softwareDataData AnalysesData SecurityDatabasesDevelopmentDiffusionDimensionsDiseaseDrug TargetingEnsureEuropeFinlandFluorescenceFundingFutureHIVHigh Performance ComputingIndiaInfrastructureInstitutionIntuitionInvestigationKineticsLaboratoriesLibrariesLicensingLinuxMaintenanceMalignant NeoplasmsManagement Information SystemsMeasuresMedicineMethodsModernizationMolecularMolecular StructureNetwork-basedNeurodegenerative DisordersNeutronsNucleic AcidsOperating SystemPeer ReviewPropertyPublicationsReactionRecordsResearchResolutionResourcesRoentgen RaysScienceServicesSideSmall Interfering RNASpectrum AnalysisSupercomputingSupport SystemSystemSystems AnalysisTechniquesTrainingUnited States National Institutes of HealthUpdateViral VectorWorkX-Ray Crystallographyanalytical ultracentrifugationautomated analysisbasebeamlinebiophysical analysisdata acquisitiondensitydesigndrug testingexperimental studyflexibilityhigh throughput analysisimprovedinstrumentinstrumentationlipid nanoparticlemacromolecular assemblymiddlewaremodels and simulationnanosciencenovelopen sourceoperationsimulationsoftware developmentstructural biologysupercomputertherapeutic developmenttooltwo-dimensionalvector
中文摘要
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英文摘要
Project Summary/Abstract
We propose to continue development and support for the UltraScan-III (US3) software suite and develop new
code and methods to address challenging biomedical research questions that can be solved with the latest
instruments available for analytical ultracentrifugation and at beamlines for small-angle X-ray and neutron
scattering experiments (SAXS/SANS) experiments. UltraScan is a comprehensive toolkit for the analysis of
data from hydrodynamic experiments and simulations. Such experiments include analytical ultracentrifugation,
SAXS/SANS, as well as bead modeling simulations. Support for this project will assure continued availability of
a mature multi-platform analysis suite with important and unique capabilities not found in any other software
packages. Chief among them are tight integration of supercomputing capabilities, LIMS support for
collaboration, and specialized analysis routines. US3 enjoys widespread use in the AUC and SAXS/SANS
communities, and offers the most robust optimization and simulation algorithms available, resulting in
unmatched detail. UltraScan provides the highest throughput, a flexible, modern GUI, and a comprehensive list
of analysis routines. Proposed developments include automated data acquisition and analysis workflows,
improvements in the fitting of floating data, improved two-dimensional grids, support for density distribution
analysis critical for the accurate characterization and quantification of viral vectors, lipid nanoparticles loaded
with cancer drugs or nucleic acids, and other vectors used for the delivery of medicines or CRISPR technology.
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Continued Development and Maintenance of the UltraScan Software
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批准号:10210402
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项目类别:
-
资助金额:$29.31万
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财政年份:2016
-
负责人:Emre H. Brookes
-
依托单位:
Continued Development and Maintenance of the UltraScan Software
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批准号:10461796
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项目类别:
-
资助金额:$29.31万
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财政年份:2016
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负责人:Emre H. Brookes
-
依托单位:
Continued Development and Maintenance of the UltraScan Software
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批准号:10673959
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项目类别:
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资助金额:$29.31万
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财政年份:2016
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负责人:Emre H. Brookes
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依托单位:
Development of an UltraScan Meta-Scheduler for HPC Job Submission
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批准号:10609259
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项目类别:
-
资助金额:$24.19万
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财政年份:2016
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负责人:Emre H. Brookes
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依托单位:
Struct. Invest. of Hsp70 and TGFb by Solution Studies and High-Perform. Comput.
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批准号:8699784
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项目类别:
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资助金额:$12.39万
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财政年份:2010
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负责人:Emre H. Brookes
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依托单位:
Struct. Invest. of Hsp70 and TGFb by Solution Studies and High-Perform. Comput.
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批准号:7989929
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项目类别:
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资助金额:$12.47万
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财政年份:2010
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负责人:Emre H. Brookes
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依托单位:
Struct. Invest. of Hsp70 and TGFb by Solution Studies and High-Perform. Comput.
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批准号:8529559
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项目类别:
-
资助金额:$12.39万
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财政年份:2010
-
负责人:Emre H. Brookes
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依托单位:
Struct. Invest. of Hsp70 and TGFb by Solution Studies and High-Perform. Comput.
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批准号:8118613
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项目类别:
-
资助金额:$12.43万
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财政年份:2010
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负责人:Emre H. Brookes
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依托单位:
Struct. Invest. of Hsp70 and TGFb by Solution Studies and High-Perform. Comput.
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批准号:8306220
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项目类别:
-
资助金额:$12.39万
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财政年份:2010
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负责人:Emre H. Brookes
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依托单位:
海外基金