TR&D Project 2: Tissue and cellular elemental distribution, and image correlation
TR&D Project 2: Tissue and cellular elemental distribution, and image correlation
批准号:
10197970
负责人:
Chris Johnson Jacobsen
金额:
$22.97万
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
未结题
起止时间:
2020-07-01 至 2025-05-31
关键词:
3-DimensionalAblationAreaAutomobile DrivingBiological SciencesBrainCellsChemical StructureChemicalsCodeCommunitiesComputer softwareDepartment of EnergyDevelopmentDyesElementsFluorescenceFluorescence MicroscopyFundingGoldHomeostasisImageImage AnalysisInductively Coupled Plasma Mass SpectrometryLabelLaboratoriesLasersLengthLightLight MicroscopeMachine LearningMapsMetabolicMetalsMethodologyMethodsMicroscopeMicroscopyModalityModelingOrganPathologyPeer ReviewPhotonsPreparationProductionProteinsPythonsRadiation induced damageReproductionResearch PersonnelResistanceResolutionResourcesRoentgen RaysSamplingScanningScheduleSignal TransductionSliceSourceSpecimenStructureSynchrotronsSystemTensorFlowThickThree-Dimensional ImagingTimeTissuesTrace ElementsUnited States National Institutes of HealthX ray microscopyX-Ray Tomographyabsorptionbasebeamlinecellular imagingchemical standardcomputer programconfocal imagingcostcryogenicsexperiencefluorescence imagingimage visualizationimaging modalityinstrumentlight microscopynanoscalenovel strategiesopen sourceopen source tooloperationpreservationprogramsprototypequantitative imagingreconstructionspectroscopic imagingsupercomputertechnology research and developmenttomographytooltransmission process
中文摘要
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英文摘要
PROJECT SUMMARY - TR&D PROJECT 2
Tissue and Cellular Elemental Distribution, and Image Correlation
This Technology Research and Development Project will develop Scanning X-Ray Fluorescence Microscopy
(SFXM) for quantitative views of trace element distributions in cells and tissues. It will use cryogenic specimen
preparation and imaging conditions as a gold standard for chemical and structural preservation as well as
radiation damage resistance. We will develop a cryo SXFM capability with a hundredfold increase in accessible
specimen area for beamline 8-BM of the Advanced Photon Source (APS) at Argonne National Laboratory, and
provide support for its operation. This will double the accessible experimental time in cryo SXFM at the APS,
divided between our BTRR and other biomedical researchers via no-cost, peer-reviewed General User
Proposals to the APS.
We will also introduce cryo specimen cross-compatibility with the nanoscale SFXM capabilities of the NIH-
purchased Bionanoprobe at the APS, laser-ablation inductively coupled plasma mass spectrometry (LA-ICP-
MS; TR&D 1) at Northwestern, photoacoustic microscopy (PAM; TR&D 2) at Northwestern, and correlative
cryogenic confocal light microscope (C3LM) at the APS.
We will develop and make available PyElements, a software platform to provide an integrated and cross-
registered view of quantitative images from all of these modalities. We will incorporate into PyElements a
numerical optimization approach to correcting for self-absorption of x-ray fluorescence in thicker specimens, so
that one can obtain quantitative information even from thicker specimens in 3D. All of these developments will
take place in the context of our Driving Biomedical Projects, with large-area cryo SXFM being of particular
importance to Theme A (Metal homeostasis or dysregulation in brain function), Theme C (Metal fluxes controlling
reproduction and development), and Theme D (Metal imbalances in metabolic pathology).
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TR&D Project 2: Tissue and cellular elemental distribution, and image correlation
-
批准号:10494059
-
项目类别:
-
资助金额:$23.05万
-
财政年份:2020
-
负责人:Chris Johnson Jacobsen
-
依托单位:
Resource for Quantitative Elemental Mapping for the Life Sciences
-
批准号:10494054
-
项目类别:
-
资助金额:$96.24万
-
财政年份:2020
-
负责人:Chris Johnson Jacobsen
-
依托单位:
Resource for Quantitative Elemental Mapping for the Life Sciences
-
批准号:10197965
-
项目类别:
-
资助金额:$98.63万
-
财政年份:2020
-
负责人:Chris Johnson Jacobsen
-
依托单位:
Resource for Quantitative Elemental Mapping for the Life Sciences
-
批准号:10652601
-
项目类别:
-
资助金额:$95.7万
-
财政年份:2020
-
负责人:Chris Johnson Jacobsen
-
依托单位:
TR&D Project 2: Tissue and cellular elemental distribution, and image correlation
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批准号:10652607
-
项目类别:
-
资助金额:$23.13万
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财政年份:2020
-
负责人:Chris Johnson Jacobsen
-
依托单位:
Supplement for Resource for Quantitative Elemental Mapping for the Life Sciences
-
批准号:10586510
-
项目类别:
-
资助金额:$10.0万
-
财政年份:2020
-
负责人:Chris Johnson Jacobsen
-
依托单位:
Cryo ptychography combined with x-ray fluorescence analysis of metals in cells
-
批准号:9521374
-
项目类别:
-
资助金额:$3.29万
-
财政年份:2017
-
负责人:Chris Johnson Jacobsen
-
依托单位:
Cryo ptychography combined with x-ray fluorescence analysis of metals in cells
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批准号:9899251
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项目类别:
-
资助金额:$25.47万
-
财政年份:2013
-
负责人:Chris Johnson Jacobsen
-
依托单位:
Cryo ptychography combined with x-ray fluorescence analysis of metals in cells
-
批准号:8620670
-
项目类别:
-
资助金额:$28.57万
-
财政年份:2013
-
负责人:Chris Johnson Jacobsen
-
依托单位:
Cryo ptychography combined with x-ray fluorescence analysis of metals in cells
-
批准号:8800559
-
项目类别:
-
资助金额:$28.53万
-
财政年份:2013
-
负责人:Chris Johnson Jacobsen
-
依托单位:
Cryo ptychography combined with x-ray fluorescence analysis of metals in cells
-
批准号:8998032
-
项目类别:
-
资助金额:$28.49万
-
财政年份:2013
-
负责人:Chris Johnson Jacobsen
-
依托单位:
Cryo ptychography combined with x-ray fluorescence analysis of metals in cells
-
批准号:8421911
-
项目类别:
-
资助金额:$28.36万
-
财政年份:2013
-
负责人:Chris Johnson Jacobsen
-
依托单位:
The structure of content: phase contrast in a microprobe
-
批准号:7203158
-
项目类别:
-
资助金额:$22.17万
-
财政年份:2007
-
负责人:Chris Johnson Jacobsen
-
依托单位:
The structure of content: phase contrast in a microprobe
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批准号:7405355
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项目类别:
-
资助金额:$19.36万
-
财政年份:2007
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负责人:Chris Johnson Jacobsen
-
依托单位:
Spectromicroscopy for biochemical analysis of sperm
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批准号:6732037
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项目类别:
-
资助金额:$24.19万
-
财政年份:2002
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负责人:Chris Johnson Jacobsen
-
依托单位:
Spectromicroscopy for biochemical analysis of sperm
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批准号:6624086
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项目类别:
-
资助金额:$24.19万
-
财政年份:2002
-
负责人:Chris Johnson Jacobsen
-
依托单位:
Spectromicroscopy for biochemical analysis of sperm
-
批准号:6472301
-
项目类别:
-
资助金额:$24.19万
-
财政年份:2002
-
负责人:Chris Johnson Jacobsen
-
依托单位:
High Resolution 3D X-ray Diffraction Microscope
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批准号:7178506
-
项目类别:
-
资助金额:$27.42万
-
财政年份:2001
-
负责人:Chris Johnson Jacobsen
-
依托单位:
High Resolution 3D X-ray Diffraction Microscope
-
批准号:7034055
-
项目类别:
-
资助金额:$28.14万
-
财政年份:2001
-
负责人:Chris Johnson Jacobsen
-
依托单位:
High Resolution 3D X-ray Diffraction Microscope
-
批准号:7354100
-
项目类别:
-
资助金额:$27.42万
-
财政年份:2001
-
负责人:Chris Johnson Jacobsen
-
依托单位:
海外基金