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Integrative Characterization on the function of COPD GWAS gene, HHIP

Integrative Characterization on the function of COPD GWAS gene, HHIP
COPD GWAS 基因 HHIP 功能的综合表征
批准号:
10379283
负责人:
Wenyi Wei
金额:
$65.55万
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
已结题
起止时间:
2020-04-05 至 2024-03-31
关键词:
3-DimensionalAddressAgeAgonistAirway FibrosisAlveolarAlveolusBindingBiochemicalBiologicalBiological AssayCRISPR/Cas technologyCause of DeathCell Differentiation processCell ProliferationCellsChromatinChronicChronic Obstructive Pulmonary DiseaseCigarette smoke-induced emphysemaClustered Regularly Interspaced Short Palindromic RepeatsCoculture TechniquesCollagenCommunicationDataDepositionDevelopmentDifferentiation and GrowthDisease susceptibilityDistalEnzymesEpithelial CellsErinaceidaeFibroblastsFoundationsGenerationsGenesGenetic DeterminismGenetic Predisposition to DiseaseGenotypeGlycolysisGrowthHumanHyperplasiaImpairmentIn VitroInvestigationIsoenzymesLGR5 geneLungMeasurementMediatingMesenchymalMetabolicMethodsModelingMolecularMusOrganoidsOxidative PhosphorylationOxygen ConsumptionPathologicPathway interactionsPatientsPredispositionProtein DeficiencyProteinsPublic HealthPublishingPulmonary EmphysemaPyruvate KinaseRoleSHH geneSignal TransductionSmokeSmooth Muscle MyocytesTestingTomatoesWorkaerobic glycolysisage relatedaging populationairway obstructionairway remodelingalveolar type II cellbasecell growthcell regenerationcell typecigarette smokecigarette smoke-inducedcigarette smoke-induced COPDcigarette smokingdisease phenotypeexposure to cigarette smokegenome editinggenome wide association studyin vivoinhibitorinsightmutantnovelpersonalized medicinepreventprotein expressionpulmonary functionrespiratory smooth musclerisk variantsingle-cell RNA sequencingstem cellstargeted treatment

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Chronic obstructive pulmonary disease (COPD), ranks as the third leading cause of death in the U.S. It is also strongly influenced by cigarette smoke (CS) and genetic predisposition. HHIP, encoding Hedgehog interacting protein, has consistently been associated with the susceptibility to COPD including airway remodeling and emphysema. However, the molecular mechanism underlying this association remains incompletely understood. Our published work has demonstrated that Hhip heterozygous mice (Hhip+/-) recapitulated multiple COPD pathological features including smoke- and age-related emphysema and airway remodeling. We also found that HHIP is highly expressed in Lgr6-expressing airway smooth muscle cells (ASMCs) and Lgr5- expressing alveolar mesenchymal cells; has reduced expression in COPD ASMCs that display a metabolic shift from oxidative phosphorylation to glycolysis associated with increased cell growth. Furthermore, alveolar fibroblasts-derived HHIP promotes proliferation of AT II (alveolar type II) cells in alveolar organoid co-culture model. These findings suggested that Hhip, the key genetic determinant for COPD, possibly modulates both airway remodeling and emphysema through complementarily intrinsic and extrinsic signaling in two major lung mesenchymal cell types: ASMCs and alveolar mesenchymal cells. In this current proposal, we aim to extend our previous studies by addressing two mechanistic questions related with HHIP: 1) How deficiency of Hhip in ASMCs promote airway remodeling by increasing airway thickening and cell hyperplasia through metabolic reprograming and 2) whether and how deficiency of Hhip in alveolar mesenchymal cells have impaired niche to support AT II cell generation. These questions will be addressed through the combinations of biochemical assays, lineage tracing, CRISPR-based genome editing and organoid co-culture models. In Aim1, we have identified a novel interaction between HHIP and PKM2 (pyruvate kinase isozyme M2), a rate-limiting enzyme in the last step for glycolysis. We will further characterize their interaction in AMSCs as well as determine impacts of HHIP on CS-induced airway remodeling. In Aim 2, we hypothesize that Hhip deficiency leads to impaired niche function in Lgr5+ alveolar mesenchymal cells that are important for AT II cells regeneration thereby determines emphysema susceptibility. To test this, we choose to conditionally deplete Hhip in Lgr5+ cells, a known alveolar mesenchymal cells marker followed by CS exposure and subsequent measurements on airspace size, the activity of the Wnt and Hedgehog pathway and proliferation and differentiation of both alveolar mesenchymal cells (Lgr5+) and AT II cells by complementary approaches in Aim 2.1. In Aim 2.2., we will use alveolar organoid co-culture model to dissect the mechanism by which Hhip determines niche function using either murine cells from Hhip deficient mice or from human primary fibroblasts edited by CRISPR/Cas-9 method targeting HHIP. Successful completion of this project will illuminate molecular insights into CS-induced COPD susceptibility determined by HHIP.
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Deciphering the physiological role and interplay between ubiquitination and phosphorylation pathways to guide targeted cancer therapies
Deciphering the physiological role and interplay between ubiquitination and phosphorylation pathways to guide targeted cancer therapies
Deciphering the physiological role and interplay between ubiquitination and phosphorylation pathways to guide targeted cancer therapies
Integrative Characterization on the function of COPD GWAS gene, HHIP
  • 批准号:
    9886349
  • 项目类别:
  • 资助金额:
    $67.53万
  • 财政年份:
    2020
  • 负责人:
    Wenyi Wei
  • 依托单位:
海外基金