A Unified High Performance Web Service for Systems Genetics and Precision Medicine
A Unified High Performance Web Service for Systems Genetics and Precision Medicine
批准号:
10210974
负责人:
Pjotr Prins
金额:
$45.37万
依托单位国家:
美国
项目类别:
财政年份:
2017
资助国家:
美国
项目状态:
未结题
起止时间:
2017-04-15 至 2025-06-30
关键词:
Animal ModelAreaBioinformaticsBiological ModelsBiologyCaenorhabditis elegansCandidate Disease GeneCodeCommunitiesCommunity ParticipationComplexComputer softwareComputing MethodologiesDataData AnalysesData CollectionData ScientistData SetDatabasesDrosophila genusEquilibriumExperimental GeneticsFAIR principlesFoundationsFundingGenerationsGenesGeneticGenetic DiseasesGenetic MedicineGenetic studyGenomicsGenotypeGoalsHealthHumanHuman GeneticsInternetJointsKnowledgeLinear ModelsLinkMachine LearningMedical GeneticsMetadataMethodsModelingMolecularMotivationMultiomic DataMusNational Institute of General Medical SciencesOnline SystemsOntologyOrganismPathway AnalysisPerformancePhenotypePopulationPopulation HeterogeneityPositioning AttributeProgramming LanguagesPythonsQuality ControlRandomizedRattusReproducibilityResearchResearch PersonnelResourcesRoleSample SizeScienceSecureShipsSiteSolidStructureSyntenySystemTestingTimeTissuesTranslationsTrustUnited States National Institutes of HealthVariantaddictioncausal modelcohortcomputerized toolsdata curationdata reusedata sharingdata toolsdata visualizationdisorder riskexperimental studygenetic analysisgenome wide association studygenomic datahigh throughput analysishigh throughput technologyimprovedinnovationinsightpan-genomeprecision medicineprototypesimulationskillsstatisticstooltraittranslational geneticsweb services
中文摘要
高通量技术通过对活生物体进行深度表型分析而改变了生物学。
遗传随机化群体中的深度表型分析为理解
因果关系-这是系统遗传学和精确医学的承诺。尽管取得了进展,
数据收集和遗传和基因组资源的可用性,
这些数据提出了计算和统计方面的挑战。基因网络项目的目标是
提供一个创新平台,充分利用系统遗传学的数据和计算工具。
拟议的项目将侧重于通过扩大社区来扩大网络服务的影响
参与网络服务和加强为网络服务提供动力的计算引擎。我们将
通过提供数据输入和管理的自动化工具来增强我们的数据库(目标1);我们将改进工具
用于高通量性状的遗传分析(目标2);实现动物之间的双向信息共享
模型和人类遗传学研究(目标3);并提供一个平台,
计算社区(目标4)。
英文摘要
High-throughput technologies have transformed biology by enabling deep phenotyping of living organisms.
Deep phenotyping in genetically randomized populations provides a powerful resource for understanding
cause and effect – this is the promise of systems genetics and precision medicine. Despite the advances in
data collection and the availability of genetic and genomic resources, generation of actionable knowledge from
these data presents computational and statistical challenges. The goal of the GeneNetwork project is to
provide a platform of innovation to make the best use of the data and computational tools for systems genetics.
The proposed project will focus on broadening the impact of the web service by broadening community
participation in the web service and strengthening computational engine powering the web service. We will
enhance our database by providing automated tools for data entry and curation (Aim 1); we will improve tools
for genetic analysis of high-throughput traits (Aim 2); enable bidirectional information sharing between animal
model and human genetic studies (Aim 3); and provide a platform for toolset prototying and testing by the
computational community (Aim 4).
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会议论文
A Unified High Performance Web Service for Systems Genetics and Precision Medicine
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批准号:10454353
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项目类别:
-
资助金额:$42.9万
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财政年份:2017
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负责人:Pjotr Prins
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依托单位:
国内基金
海外基金
层出镰刀菌氮代谢调控因子AreA 介导伏马菌素 FB1 生物合成的作用机理
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批准号:2021JJ40433
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项目类别:省市级项目
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资助金额:--
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批准年份:2021
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负责人:孙磊
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依托单位:
寄主诱导梢腐病菌AreA和CYP51基因沉默增强甘蔗抗病性机制解析
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批准号:32001603
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项目类别:青年科学基金项目
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资助金额:24.0万元
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批准年份:2020
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负责人:段真珍
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依托单位:
AREA国际经济模型的移植.改进和应用
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批准号:18870435
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项目类别:面上项目
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资助金额:2.0万元
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批准年份:1988
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负责人:史树中
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依托单位: