Three-Dimensional Structure of Eukaryote Chromosomes
Three-Dimensional Structure of Eukaryote Chromosomes
批准号:
10227079
负责人:
MICHAEL LEVITT
金额:
$0.0万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2018
资助国家:
美国
项目状态:
已结题
起止时间:
2018-09-20 至 2022-01-21
关键词:
3-DimensionalAddressAdoptedAmphibiaBase SequenceBiologicalBiologyCaliberCell Cycle StageCell Differentiation processCell physiologyCellsChemicalsChemistryChromatinChromatin FiberChromatin LoopChromosome CondensationChromosome StructuresChromosomesComplexCytologyDNADNA SequenceDNA StructureDimensionsDiseaseDrosophila genusDyesEpigenetic ProcessEukaryotaExhibitsFluorescenceFrequenciesGene ExpressionGene Expression RegulationGeneticGenomeHealthHeterogeneityHi-CHistonesHumanHuman GenomeImidazoleIndividualInterphaseKnowledgeLarvaLengthLightLinkMalignant NeoplasmsMapsMeasuresMeiosisMethodsMicroscopeMitosisMitotic ChromosomeMolecularNucleosomesNylonsOrganellesPatternProteinsPyrrolesReportingResearchResolutionScienceSiteStructureTimeTransactWalkingZinc Fingersalpha helixbasecell typecrosslinkdesignflexibilitygene inductiongene repressioninnovationinsightlight microscopynovel therapeuticsprotein distributionrepairedstructural biologythree dimensional structurevirtual
中文摘要
染色体的三维结构是细胞科学中最丰富的未知领域。
染色体是所有细胞中最大、最有活力、最复杂的
细胞器。它们是最基本的,潜在的细胞分化,细胞生理学,
和疾病。它们也是最神秘的,同时表现出结构性的
异质性和有序性,身体的柔韧性和刚性,以及功能活动和
沉默。我们将通过染色体结构的测定来解开谜团。
目前对染色体结构几乎一无所知。然而,
染色体结构是染色体功能的关键;它与所有
DNA交易、表观遗传学和疾病中的异常。
我们提出了染色体结构问题的一个综合解决方案。我们会
通过TADS追踪染色质纤维从核小体到核小体的路径
以及相互影响的区域。我们将以单核小体分辨率“行走”3-D基因组。
我们将使用超分辨率光学显微镜和dna序列特异性染料。
分子(荧光发射体)用于此目的。10-20纳米的分辨率,
与核小体的大小(10 Nm)相当,通常是通过电流实现的
显微镜。发射体对单个核小体的定位可以是
使用特别设计的吡咯咪唑聚酰胺和锌
手指蛋白。这些分子一旦被设计出来,就会应用到染色体上。
在所有类型的细胞中,在细胞周期的所有阶段,在正常的
和疾病状态。它们将通过提供结构范例来改变这一领域,并
通过使其他人能够解决遗传化学和生物学中的无数问题
轻快、敏锐的态度。
好了!
英文摘要
The 3-D structure of chromosomes is the richest unexplored territory in cell science.
Chromosomes are the largest, most dynamic, and most complex of all cellular
organelles. They are most fundamental, underlying cell differentiation, cell physiology,
and disease. They are also most enigmatic, exhibiting at the same time structural
heterogeneity and order, physical flexibility and rigidity, and functional activity and
silencing. We will dispel the mysteries by the determination of chromosome structure.
Virtually nothing is known about chromosome structure at the present time. And yet
chromosome structure is the key to chromosome function; it is inextricably linked to all
DNA transactions, to epigenetics, and to aberrations in disease.
We propose a comprehensive solution of the chromosome structure problem. We will
trace the path of the chromatin fiber, from nucleosome to nucleosome, through TADs
and intervening regions. We will "walk" the 3-D genome at single nucleosome resolution.
We will employ super resolution light microscopy with DNA sequence-specific dye
molecules (fluorescence emitters) for the purpose. A resolution of 10-20 nm,
comparable to the size of a nucleosome (10 nm) is routinely achieved with current
microscopes. The localization of an emitter to an individual nucleosome can be
accomplished with the use of specially designed pyrrole-imidazole polyamides and zinc
finger proteins. These molecules, once designed, will be applicable to chromosome
structure determination in all types of cell, at all stages of the cell cycle, in both normal
and disease states. They will transform the field, by providing structural paradigms, and
by enabling others to address innumerable problems in genetic chemistry and biology in
a facile, penetrating manner.
!
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Three-Dimensional Structure of Eukaryote Chromosomes
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批准号:10018877
-
项目类别:
-
资助金额:$144.01万
-
财政年份:2018
-
负责人:MICHAEL LEVITT
-
依托单位:
Emergent Properties of Complex Systems: From Atoms to Macromolecules; from Humans to Societies
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批准号:10622276
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资助金额:$55.93万
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财政年份:2017
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负责人:MICHAEL LEVITT
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依托单位:
Cost Effective, Synergistic Macromolecular Structure Determination, Analysis & Simulation
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批准号:10016355
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项目类别:
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资助金额:$56.79万
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财政年份:2017
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负责人:MICHAEL LEVITT
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依托单位:
COMPUTATIONAL SUPPORT FOR CRITICAL ASSESMENT OF STRUCTURE PREDICTION (CASP) OF
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批准号:7181631
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项目类别:
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资助金额:$0.1万
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财政年份:2004
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负责人:MICHAEL LEVITT
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依托单位:
Accurate Modeling in Structural Genomics
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批准号:8118955
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项目类别:
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资助金额:$33.17万
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财政年份:2001
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负责人:MICHAEL LEVITT
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依托单位:
Accurate Modeling in Structural Genomics
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批准号:8887126
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资助金额:$33.53万
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财政年份:2001
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负责人:MICHAEL LEVITT
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Accurate Modeling in Structural Genomics
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批准号:7728729
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资助金额:$33.85万
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财政年份:2001
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依托单位:
Accurate Molecular Modeling in Structural Genomics
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批准号:6364131
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资助金额:$27.48万
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财政年份:2001
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Accurate Modeling in Structural Genomics
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批准号:8578932
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资助金额:$33.53万
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财政年份:2001
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负责人:MICHAEL LEVITT
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Accurate Molecular Modeling in Structural Genomics
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资助金额:$33.53万
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财政年份:2001
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负责人:MICHAEL LEVITT
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Accurate Molecular Modeling in Structural Genomics
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批准号:6785470
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资助金额:$27.48万
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财政年份:2001
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负责人:MICHAEL LEVITT
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Accurate Modeling in Structural Genomics
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资助金额:$33.53万
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资助金额:$29.51万
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负责人:MICHAEL LEVITT
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SIMULATION OF PROTEIN DYNAMICS AND UNFOLDING IN SOLUTION
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批准号:2180878
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项目类别:
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资助金额:$23.31万
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财政年份:1989
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负责人:MICHAEL LEVITT
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依托单位:
SIMULATION OF PROTEIN DYNAMICS AND UNFOLDING IN SOLUTION
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批准号:2444699
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