Mechanistic and metabolomic underpinnings of ALDH1L1 polymorphisms in the regulation of glycine metabolism

ALDH1L1 多态性调节甘氨酸代谢的机制和代谢组学基础

• 批准号: 10663183
• 负责人: SERGEY A KRUPENKO
• 金额: $ 62.59万
• 依托单位: UNIV OF NORTH CAROLINA CHAPEL HILL
• 依托单位国家: 美国
• 财政年份: 2021
• 资助国家: 美国
• 起止时间: 2021-08-01 至 2026-07-31
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/10663183
• 关键词: Address; Affect; Anabolism; Carbon; Cell Line; Cells; Child; Coenzymes; Diet; Disease; Enzymes; Ethnic Population; Etiology; Evaluation; Folic Acid; Folic Acid Deficiency; Formyltetrahydrofolates; Frequencies; Generations; Genes; Genetic Polymorphism; Genotype; Glycine; Haplotypes; Health; Hispanic; Holoenzymes; Homeostasis; Homocysteine; Human; Individual; Intake; Knock-out; Knockout Mice; Knowledge; Left; Link; Liver; Measures; Mediating; Metabolic; Metabolic Diseases; Metabolic Marker; Metabolic Pathway; Metabolic stress; Metabolism; Methylation; Mus; Nutrient; Obesity; Outcome; Oxidoreductase; Pathology; Pathway interactions; Play; Population; Predisposition; Property; Proteins; Purines; Reaction; Regulation; Reporting; Research; Risk Factors; Role; Route; Serine; Serum; Single Nucleotide Polymorphism; Source; Tetrahydrofolates; Variant; Vitamins; cohort; design; dietary; disorder risk; folic acid metabolism; folic acid supplementation; insight; metabolic phenotype; metabolomics; prevent; response; response biomarker

ALDH1L1, a common enzyme in folate metabolism, converts 10-formyltetrahydrofolate (10-formyl-THF) to tetrahydrofolate (THF). This reaction is known to regulate the de novo purine biosynthesis and folate-dependent homocysteine re-methylation cycle. It could also play a key role in controlling the flux of one-carbon groups to anabolic pathways. In support of the role in the regulation of folate metabolism, we have recently shown that the loss of the ALDH1L1 gene in knockout mice causes functional folate deficiency, even when the mice had sufficient folate intake. Analysis of Aldh1l1 knockout mice also showed that the enzyme is the main regulator of glycine metabolism in the liver: KO mice have lower levels of glycine and glycine conjugates, indicating that the enzyme is involved in the folate-dependent synthesis of glycine from serine. We have further reported that human ALDH1L1 has six common non-synonymous exonic SNPs at the polymorphic loci rs3796191, rs2886059, rs9282691, rs2276724, rs1127717 and rs4646750 with the occurrence of haplotypes associated with these SNPs being remarkably different between ethnic populations. Our analysis of an established cohort of Hispanic children, Viva La Familia, has shown a significant reduction of serum glycine and increase in serine/glycine ratio in children with rs2276724 and rs3796191, indicating deregulation of serine to glycine conversion and re- capitulating our mouse findings. ALDH1L1 non-synonymous SNPs were also associated with markers of metabolic stress and adiposity in this cohort. Based on our findings, we hypothesize that non-synonymous ALDH1L1 SNPs produce enzyme variants with altered catalytic activity and/or stability that affects their ability to metabolize 10-formyl-THF and thus deregulates glycine metabolism. Accordingly, individuals with specific haplotypes have different ratios of THF/10-formyl-THF and serine/glycine, and altered levels of glycine and its conjugates, with perturbations in the metabotype representing a signature of metabolic health. This proposal will address the question of how haplotype-specific ALDH1L1 variants affect folate metabolism and the overall cellular metabotype, and how the haplotype-specific effect is modified by folate supplementation, by pursuing the following specific aims. Aim 1. Functionally characterize the ALDH1L1 enzyme variants from common human haplotypes. Aim 2. Determine the impact of major ALDH1L1 haplotypes on cellular metabolism and haplotype- specific responses to various folate supplementations. Aim 3. Link ALDH1L1 haplotypes to the folate-dependent regulation of glycine metabolism and health outcomes in humans. ALDH1L1 variants are very common in different populations but their role in folate homeostasis and in the etiology of metabolic disease is largely unexplored. It is expected that ALDH1L1 haplotypes differently mediate the metabolic response to dietary folate that might require adjustments of folate intake for individuals bearing certain ALDH1L1 SNPs. By filling this knowledge gap, the proposed research will provide mechanistic insight into the metabolic regulation by ALDH1L1 SNPs and will lay ground for the evaluation of population-specific ALDH1L1 haplotypes as a disease risk factor.

ALDH 1 L1是叶酸代谢中的常见酶，将10-甲酰四氢叶酸（10-甲酰-THF）转化为四氢叶酸（THF）。已知该反应调节从头嘌呤生物合成和叶酸依赖性高半胱氨酸再甲基化循环。它还可以在控制一碳基团向合成代谢途径的流动方面发挥关键作用。为了支持其在调节叶酸代谢中的作用，我们最近表明，基因敲除小鼠中ALDH 1 L1基因的缺失会导致功能性叶酸缺乏，即使小鼠摄入了足够的叶酸。对Aldh 1 l1基因敲除小鼠的分析还表明，该酶是肝脏中甘氨酸代谢的主要调节因子：KO小鼠的甘氨酸和甘氨酸缀合物水平较低，表明该酶参与了叶酸依赖性的丝氨酸合成甘氨酸。我们进一步报道了人类ALDH 1 L1在多态性位点rs3796191、rs 2886059、rs 9282691、rs 2276724、rs 1127717和rs 4646750处具有6个常见的非同义外显子SNP，与这些SNP相关的单倍型的发生在种族人群之间显著不同。我们对一个已建立的西班牙裔儿童队列Viva La Familia的分析显示，在rs 2276724和rs3796191儿童中，血清甘氨酸显著降低，丝氨酸/甘氨酸比率增加，表明丝氨酸向甘氨酸转化的失调，重新证明了我们的小鼠发现。ALDH 1 L1非同义SNP也与该队列中代谢应激和肥胖的标志物相关。基于我们的发现，我们假设非同义ALDH 1 L1 SNP产生具有改变的催化活性和/或稳定性的酶变体，其影响其代谢10-甲酰-THF的能力，从而使甘氨酸代谢失调。因此，具有特定单倍型的个体具有不同的THF/10-甲酰基-THF和丝氨酸/甘氨酸比率，以及改变的甘氨酸及其缀合物水平，代谢型中的扰动代表代谢健康的特征。该提案将解决单倍型特异性ALDH 1 L1变体如何影响叶酸代谢和整体细胞代谢型的问题，以及单倍型特异性效应如何通过叶酸补充剂进行修改，通过追求以下特定目标。目标1.从常见的人类单倍型中对ALDH 1 L1酶变体进行功能表征。目标2.确定主要ALDH 1 L1单倍型对细胞代谢的影响和对各种叶酸代谢的单倍型特异性反应。目标3.将ALDH 1 L1单倍型与叶酸依赖的甘氨酸代谢调节和人类健康结果联系起来ALDH 1 L1变异体在不同人群中非常常见，但它们在叶酸稳态和代谢疾病病因学中的作用在很大程度上尚未探索。预计ALDH 1 L1单倍型以不同方式介导对膳食叶酸的代谢反应，这可能需要调整携带某些ALDH 1 L1 SNP的个体的叶酸摄入量。通过填补这一知识空白，拟议的研究将为ALDH 1 L1 SNP的代谢调节提供机制性见解，并为评估人群特异性ALDH 1 L1单倍型作为疾病风险因素奠定基础。