Towards Precise Phenotype Discovery of Obstructive Sleep Apnea with a Data-Inclusive Multi-Study Analysis Using the National Sleep Research Resource (NSRR)

使用国家睡眠研究资源 (NSRR) 通过包含数据的多项研究分析来精确发现阻塞性睡眠呼吸暂停的表型

• 批准号: 10675011
• 负责人: Bing Si
• 金额: $ 11.43万
• 依托单位: STATE UNIVERSITY OF NY,BINGHAMTON
• 依托单位国家: 美国
• 财政年份: 2022
• 资助国家: 美国
• 起止时间: 2022-08-01 至 2024-07-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/10675011
• 关键词: Address; Affect; African American population; Algorithms; Apnea; Asian Americans; Benefits and Risks; Black American; Black Populations; Cardiac health; Cardiovascular Diseases; Cardiovascular system; Categories; Cessation of life; Classification; Clinical; Clinical Research; Clinical Treatment; Clinical Trials; Cohort Studies; Collection; Common Data Element; Data; Data Element; Data Set; Deposition; Drowsiness; Enrollment; Event; Foundations; Funding; Goals; Habits; Health; Heterogeneity; Hispanic Americans; Hispanic Community Health Study; Individual; Machine Learning; Maps; Measures; Medical History; Modeling; Multi-Ethnic Study of Atherosclerosis; Obstructive Sleep Apnea; Outcome; Patient-Focused Outcomes; Patients; Phenotype; Polysomnography; Population; Population Heterogeneity; Prognosis; Prognostic Factor; Quality of life; Reproducibility; Research; Research Personnel; Resources; Risk; Severities; Sleep; Sleep Apnea Syndromes; Stratification; Testing; Treatment Efficacy; United States National Institutes of Health; Woman; cardiovascular disorder risk; cardiovascular risk factor; caucasian American; clinical application; clinical phenotype; clinical practice; cohort; community health study; comorbidity; cost; demographics; design; empowerment; epidemiology study; improved; inclusion criteria; indexing; individual patient; insight; men; middle age; mortality; novel; outcome prediction; patient stratification; phenotypic data; pre-clinical; predict clinical outcome; prognostication; prospective; risk stratification; secondary analysis; sociodemographics; targeted treatment; treatment planning; treatment strategy; validation studies

Project Summary/Abstract Obstructive sleep apnea (OSA) is highly prevalent and associated with a spectrum of cardiovascular (CV) diseases and adverse health outcomes. However, OSA treatment strategies tend to show inconsistent treatment efficacy across individuals and little or no reduction in risk of CV diseases, events, or death. Phenotype discovery is critical for precise risk stratification and targeted treatment of OSA. Substantial heterogeneity among OSA patients is likely an important contributor to the suboptimal results of clinical trials. Thus, it is critical to delineate the OSA heterogeneity and stratify patients into high-vs low-risk clusters (i.e., “phenotypes”) associated with markedly different outcomes for precise risk stratification and targeted treatment. OSA data hold great promise to facilitate OSA phenotype discovery. Rigor of Prior Research: (1) We and others identified new prognostic factors in OSA data that are associated with one or more adverse CV outcomes. (2) Emerging OSA phenotypes were defined by machine learning and clustering algorithms from multi-faceted OSA data. (3) Newly identified OSA phenotypes, predictive of patients’ benefit from OSA treatments and risk for adverse CV outcomes, laid the foundation for OSA phenotypes’ clinical utility in targeted treatment and precise prognosis. However, significant gaps exist in fully leveraging the OSA data for phenotype discovery: There is a lack of “outcome-predictive”, “clinically-interpretable”, and “reproducible” phenotypes, defined from multi-domain OSA data in a large diverse U.S. population. To address these gaps, we propose a secondary multi-study analysis that seeks to develop new classification criteria and identify phenotypes in OSA by integrating multi-domain OSA-related sleep common data elements, including but not limited to patient socio-demographics, health habits, medical history, anthropometrics, polysomnography measures, daytime sleepiness, quality of life, and cardiovascular comorbidities and mortalities, combined across three of the largest epidemiological study cohorts deposited in the NIH-funded National Sleep Research Resource (NSRR). This includes Sleep Heart Health Study, Hispanic Community Health Study, and Multi-Ethnic Study of Atherosclerosis, with at least 5,336 OSA patients from a diverse population of African American, Caucasian, Hispanic, and Asian American men and women. Aim 1: Develop a novel sparse, outcome-predictive multi-domain Factor Mixture Model for OSA phenotype identification from multi-domain mixed-typed patient pre-clinical features and clinical features. Aim 2: Apply the developed model in Aim 1 to individual and pooled NSRR datasets to: (1) identify, characterize, and validate OSA phenotypes; (2) evaluate consistency and reproducibility in findings supported by individual and pooled analyses. Impact: We will identify, characterize, and validate OSA phenotypes that assist clinicians with determining how aggressive to be with the treatment plans and assist researchers with selecting appropriate patients to enroll in clinical trials of OSA treatment, eventually leading to precise prognosis and treatment of OSA.

项目总结/文摘