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An AI/ML-ready Dataset for Investigating the Effect of Variations in CT Acquisition and Reconstruction

An AI/ML-ready Dataset for Investigating the Effect of Variations in CT Acquisition and Reconstruction
用于研究 CT 采集和重建变化影响的 AI/ML 数据集
批准号:
10842635
负责人:
William Hsu
金额:
$28.86万
依托单位国家:
美国
项目类别:
财政年份:
2022
资助国家:
美国
项目状态:
未结题
起止时间:
2022-09-01 至 2025-05-31

项目摘要

项目成果

William Hsu的其他基金

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中文摘要
翻译
定量图像特征(qif),如放射学和深度特征,在改善图像质量方面具有巨大的潜力
英文摘要
Quantitative image features (QIFs) such as radiomic and deep features hold enormous potential to improve the detection, diagnosis, and treatment assessment of various diseases. When extracting QIFs from computed tomography (CT) scans, computed values can vary based on differences in CT acquisition and reconstruction parameters, including radiation dose level, slice thickness, reconstruction kernel, and reconstruction method. The performance of artificial intelligence (AI) and machine learning (ML) models depends on the diversity of data on which the model was trained. Previous studies have shown the negative impact that differences in CT acquisition and reconstruction have on the reproducibility of radiomic feature values and the performance of AI/ML models. However, there is a dearth of real-world datasets that enable AI/ML developers and researchers can easily leverage to train and validate models that are robust to these differences. The objective of this supplement is to improve the AI/ML-readiness of real-world patient CT datasets, facilitating investigations into characterizing and mitigating the effect of variations in CT acquisition and reconstruction parameters. This project builds upon our parent R01 project (R01 EB031993, Computational Toolkit for Normalizing the Impact of CT Acquisition and Reconstruction on Quantitative Image Features), which aims to understand the effect of these variations on downstream AI/ML models and clinical tasks (e.g., nodule detection, stroke characterization) and develop effective methods for image harmonization. This project will bring together expertise in informatics, medical physics, and data/model sharing standards. In Aim 1, we will release an AI/ML-ready CT dataset of 200 chest CT scans of patients who underwent lung cancer screening and 100 non-contrast head CTs of patients with suspected stroke. Each scan will be reconstructed by varying dose, slice thickness, and kernel, resulting in over 30 different versions of the same scan. Scans will also be annotated (e.g., outlined nodule boundaries) and linked with clinical information (e.g., nodule characteristics, pathology-confirmed lung cancer diagnosis). Following FAIR principles, clinical data, scans, and annotations will be released using established common data elements and standards such as DICOM segmentation objects. In Aim 2, we will demonstrate the utility of this dataset as a benchmark for assessing the reliability and robustness of AI/ML algorithms. We will use the benchmark CT dataset to evaluate the performance of publicly available algorithms for lung nodule detection and characterization and ischemic volume estimation. We will assess the robustness of these algorithms’ performance using metrics such as sensitivity and false positives/scan (nodule detection), area under the receiver operating characteristic curve (nodule classification), and mean absolute error (stroke quantification) across different scans. Successful completion of this project will result in a unique dataset that would double the available real-world patient data that can be used to improve AI/ML algorithms related to image reconstruction, restoration/harmonization, and downstream tasks.
期刊论文(2)
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科研奖励(0)
会议论文
Assessing variability in non-contrast CT for the evaluation of stroke: The effect of CT image reconstruction conditions on AI-based CAD measurements of ASPECTS value and hypodense volume.
评估用于评估中风的非对比 CT 的变异性:CT 图像重建条件对基于 AI 的 ASPECTS 值和低密度体积的 CAD 测量的影响。
DOI: 10.1117/12.3006582
发表时间: 2024
期刊: Proceedings of SPIE--the International Society for Optical Engineering
影响因子: --
作者: [Welland,SpencerH, Kim,GraceHyunJ, Yadav,Anil, Hoffman,JohnM, Hsu,William, Brown,MatthewS, Tavakkol,Elham, Nael,Kambiz, McNitt-Gray,MichaelF]
通讯作者: McNitt-Gray,MichaelF
DOI: 10.1148/radiol.222904
发表时间: 2023-10
期刊: Radiology
影响因子: 19.7
作者: [A. Prosper;M. Kammer;Fabien Maldonado;Denise R. Aberle;William Hsu]
通讯作者: A. Prosper;M. Kammer;Fabien Maldonado;Denise R. Aberle;William Hsu
Computational Toolkit for Normalizing the Impact of CT Acquisition and Reconstruction on Quantitative Image Features
Computational Toolkit for Normalizing the Impact of CT Acquisition and Reconstruction on Quantitative Image Features
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