An AI/ML-ready Dataset for Investigating the Effect of Variations in CT Acquisition and Reconstruction
An AI/ML-ready Dataset for Investigating the Effect of Variations in CT Acquisition and Reconstruction
批准号:
10842635
负责人:
William Hsu
金额:
$28.86万
依托单位国家:
美国
项目类别:
财政年份:
2022
资助国家:
美国
项目状态:
未结题
起止时间:
2022-09-01 至 2025-05-31
关键词:
AbdomenAlgorithmsAnatomyAppearanceAreaArtificial IntelligenceBenchmarkingCharacteristicsChestClassificationClinicClinicalClinical DataCoffeeCommon Data ElementCommunitiesComplementComputed Tomography ScannersDataData CollectionData SetDetectionDiagnosisDigital Imaging and Communications in MedicineDiseaseDisease ProgressionDoseEngineeringFAIR principlesHeadHealthcareHeterogeneityImageInformaticsInvestigationIschemiaLinkLung noduleMRI ScansMachine LearningMagnetic Resonance ImagingMalignant neoplasm of lungMedicalMedical ImagingMethodsModelingMulticenter StudiesNoduleOutputParentsPathologyPatientsPerformancePhysicsPrivacyProcessROC CurveRadiation Dose UnitRadiation exposureReadinessReproducibilityResearch PersonnelRisk FactorsSample SizeScanningSeverity of illnessSliceStrokeTechnologyTestingTextureThe Cancer Imaging ArchiveThickTrainingTrustUnited States National Institutes of HealthVariantVendorVisualizationWorkX-Ray Computed Tomographyartificial intelligence algorithmcancer diagnosischest computed tomographyclinical riskclinical translationcohortcomorbiditydata sharingdata standardsdemographicsdenoisingdiverse dataexperienceimage reconstructionimaging biomarkerimaging modalityimprovedlow dose computed tomographylung cancer screeningmachine learning algorithmmachine learning methodmachine learning modelneural networknovelquantitative imagingradiomicsreconstructionrestorationtrustworthiness
中文摘要
定量图像特征(qif),如放射学和深度特征,在改善图像质量方面具有巨大的潜力
英文摘要
Quantitative image features (QIFs) such as radiomic and deep features hold enormous potential to improve the
detection, diagnosis, and treatment assessment of various diseases. When extracting QIFs from computed
tomography (CT) scans, computed values can vary based on differences in CT acquisition and reconstruction
parameters, including radiation dose level, slice thickness, reconstruction kernel, and reconstruction method.
The performance of artificial intelligence (AI) and machine learning (ML) models depends on the diversity of data
on which the model was trained. Previous studies have shown the negative impact that differences in CT
acquisition and reconstruction have on the reproducibility of radiomic feature values and the performance of
AI/ML models. However, there is a dearth of real-world datasets that enable AI/ML developers and researchers
can easily leverage to train and validate models that are robust to these differences. The objective of this
supplement is to improve the AI/ML-readiness of real-world patient CT datasets, facilitating investigations into
characterizing and mitigating the effect of variations in CT acquisition and reconstruction parameters. This project
builds upon our parent R01 project (R01 EB031993, Computational Toolkit for Normalizing the Impact of CT
Acquisition and Reconstruction on Quantitative Image Features), which aims to understand the effect of these
variations on downstream AI/ML models and clinical tasks (e.g., nodule detection, stroke characterization) and
develop effective methods for image harmonization. This project will bring together expertise in informatics,
medical physics, and data/model sharing standards. In Aim 1, we will release an AI/ML-ready CT dataset of 200
chest CT scans of patients who underwent lung cancer screening and 100 non-contrast head CTs of patients
with suspected stroke. Each scan will be reconstructed by varying dose, slice thickness, and kernel, resulting in
over 30 different versions of the same scan. Scans will also be annotated (e.g., outlined nodule boundaries) and
linked with clinical information (e.g., nodule characteristics, pathology-confirmed lung cancer diagnosis).
Following FAIR principles, clinical data, scans, and annotations will be released using established common data
elements and standards such as DICOM segmentation objects. In Aim 2, we will demonstrate the utility of this
dataset as a benchmark for assessing the reliability and robustness of AI/ML algorithms. We will use the
benchmark CT dataset to evaluate the performance of publicly available algorithms for lung nodule detection
and characterization and ischemic volume estimation. We will assess the robustness of these algorithms’
performance using metrics such as sensitivity and false positives/scan (nodule detection), area under the
receiver operating characteristic curve (nodule classification), and mean absolute error (stroke quantification)
across different scans. Successful completion of this project will result in a unique dataset that would double the
available real-world patient data that can be used to improve AI/ML algorithms related to image reconstruction,
restoration/harmonization, and downstream tasks.
期刊论文(2)
专著(0)
科研奖励(0)
会议论文
Assessing variability in non-contrast CT for the evaluation of stroke: The effect of CT image reconstruction conditions on AI-based CAD measurements of ASPECTS value and hypodense volume.
评估用于评估中风的非对比 CT 的变异性:CT 图像重建条件对基于 AI 的 ASPECTS 值和低密度体积的 CAD 测量的影响。
DOI:
10.1117/12.3006582
发表时间:
2024
期刊:
Proceedings of SPIE--the International Society for Optical Engineering
影响因子:
--
作者:
[Welland,SpencerH, Kim,GraceHyunJ, Yadav,Anil, Hoffman,JohnM, Hsu,William, Brown,MatthewS, Tavakkol,Elham, Nael,Kambiz, McNitt-Gray,MichaelF]
通讯作者:
McNitt-Gray,MichaelF
DOI:
10.1148/radiol.222904
发表时间:
2023-10
期刊:
Radiology
影响因子:
19.7
作者:
[A. Prosper;M. Kammer;Fabien Maldonado;Denise R. Aberle;William Hsu]
通讯作者:
A. Prosper;M. Kammer;Fabien Maldonado;Denise R. Aberle;William Hsu
Computational Toolkit for Normalizing the Impact of CT Acquisition and Reconstruction on Quantitative Image Features
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批准号:10530062
-
项目类别:
-
资助金额:$60.36万
-
财政年份:2022
-
负责人:William Hsu
-
依托单位:
Computational Toolkit for Normalizing the Impact of CT Acquisition and Reconstruction on Quantitative Image Features
-
批准号:10426507
-
项目类别:
-
资助金额:$61.2万
-
财政年份:2021
-
负责人:William Hsu
-
依托单位:
海外基金