Structural mechanics of MsbA family ABC transporters

描述（由申请人提供）：ATP结合盒（ABC）转运蛋白代表细胞最常用的分子结构，以三磷酸腺苷（ATP）作为能量来源驱动溶质主动跨膜转运。ABC转运蛋白存在于所有生物体中，并且在完全测序的微生物基因组中包括最大的基因家族之一。至少有一种细菌ABC转运蛋白已被证明是必不可少的生活力的E。大肠杆菌，而其他已被证明作为细菌致病因子的功能。人类ABC转运蛋白的异常功能在多种疾病中起着重要作用，包括囊性纤维化、肾上腺脑白质营养不良和晚期肿瘤和白血病的多药耐药性。我实验室以前的研究有助于确定ABC转运蛋白中结构定型的ABC马达结构域利用ATP的结合和水解来进行机械工作的机制。使用相结合的酶学和晶体学的研究，我们表明，ATP结合保守的序列基序驱动ABC马达域形成一个“ATP三明治二聚体”。这种ATP诱导的二聚化被认为代表了泵的动力冲程，因为假设在二聚体形成期间ABC的物理运动驱动介导溶质转运的跨膜结构域中的基本构象重排。我们建议延长我们早期的研究ABC转运马达域的机械化学反应周期，以表征这些变构构象变化的跨膜结构域，驱动溶质转运在一个特定的ABC外排泵类的结构细节。我们提出的研究涉及遗传学、酶学和晶体学方法的结合，以解决这一基本的生物物理问题。这项工作的成功完成将提供更深层次的结构和机制的理解，这将有利于对ABC转运蛋白超家族中致病蛋白的分子药理学的研究。

DESCRIPTION (provided by applicant): ATP-binding cassette (ABC) Transporters represent the molecular architecture most commonly employed by cells to drive the active transport of solutes across membranes using adenosine triphosphate (ATP) as an energy source. ABC Transporters occur in all living organisms and comprise one of the largest gene family in fully sequenced microbial genomes. At least one bacterial ABC Transporter has been shown to be essential for the viability of E. coli, while others have been shown to function as bacterial pathogenicity factors. The aberrant function of human ABC Transporters plays a central role in a variety of diseases including cystic fibrosis, adrenoleukodystrophy, and multidrug resistance in advanced tumors and leukemias. Previous research from my lab has helped to define the mechanism by which the structurally-stereotyped ABC motor domains in ABC Transporters employ the binding and hydrolysis of ATP to perform mechanical work. Using combined enzymological and crystallographic studies, we showed that ATP binding to conserved sequence motifs drives the formation an "ATP-sandwich dimer" by the ABC motor domains. This ATP-induced dimerization is believed to represent the power-stroke of the pumps because the physical movements of the ABC's during dimer formation is hypothesized to drive the essential conformational rearrangements in the transmembrane domains that mediate solute transport. We propose to extend our earlier studies of the mechanochemical reaction cycle of ABC Transporter motor domains to characterize the structural details of these allosteric conformational changes in the transmembrane domains that drive solute transport in one specific class of ABC efflux pumps. Our proposed studies involve a comgination of genetic, enzymological, and crystallographic approached to this fundamental biophysical problem. Successful completion of this work would provide deeper structural and mechanistic understanding that would facilitate studies on the molecular pharmacology of the disease-causing proteins in the ABC Transporter superfamily.