Investigating sex differences in DDX3X mouse models
Investigating sex differences in DDX3X mouse models
批准号:
10782849
负责人:
Stephen Nicholas Floor
金额:
$6.05万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2021
资助国家:
美国
项目状态:
未结题
起止时间:
2021-01-01 至 2025-11-30
关键词:
BrainCell CycleCell Differentiation processCell physiologyCellsCollaborationsCommunitiesCompensationComplementCritical ThinkingDataDevelopmentDevelopmental Delay DisordersDiagnosticEmbryoEmbryologyEpilepsyEtiologyFamilyFemaleFoundationsFundingFutureGoalsGrantHeterozygoteHistologyImpairmentIntellectual functioning disabilityKnock-outLinkMedicalMentorsMentorshipMessenger RNAMicrocephalyMicroscopyMissense MutationMolecularMusMutationNatureNeurodevelopmental DisorderNeurosciencesNonsense MutationPathologyPhenocopyPhenotypePhysiciansPositioning AttributeProductivityProteinsRNA HelicaseRNA-Binding ProteinsResearchResearch PersonnelRoleScientistSex DifferencesSyndromeTechnical ExpertiseTechniquesTechnologyTestingTherapeuticTherapeutic InterventionTrainingTranslational RegulationTranslationsWritingautism spectrum disorderbrain malformationcareercareer developmentcell fate specificationde novo mutationdesigndevelopmental neurobiologydifferential expressionexperimental studygraduate schoolimpaired brain developmentinsightknock-downloss of functionmalemouse geneticsmouse modelnerve stem cellnervous system disorderneuralneurogenesisparalogous genepost-doctoral trainingsexsexual dimorphismsingle cell analysissingle-cell RNA sequencingskillsstem cell proliferationstem cellstranscriptometranscriptomicsvirtual
中文摘要
摘要
RNA结合蛋白DDX3X的从头突变导致DDX3X综合征。DDX3X
基因突变也与自闭症谱系障碍(ASD)有关,可能占到
女性不明原因的发育迟缓(DD)。然而,我们对DDX3X功能的理解
发育中的大脑是有限的。我们的资助旨在了解
DDX3X功能丧失和错义突变扰乱细胞功能。这份副刊将
关注与DDX3X相关的性二型表型。大多数从头突变发生在DDX3X
虽然观察到女性的病例数量在增加,但男性的病例数量有所增加。我们发现
女性体内DDX3X基因的完全缺失会导致严重的小头畸形。相比之下,完整的
男性的基因敲除,女性的单倍体不足。我们的数据表明,这些
雄性和雌性之间的差异可能是由于Paralog基因Ddx3y的表达发生了变化。
在这份补充材料中,我们将检验这一假设,即男性和女性的表型差异
与DDX3X相关的损失是由Paralog Ddx3y补偿的。为了测试这一点,我们将
使用单细胞转录组技术来量化细胞组成和相关的转录组变化
男性和女性胚胎大脑中的DDX3X缺失。此外,我们将使用击倒和
检测Ddx3y和DDX3X对胚胎脑功能冗余的抢救性实验
发展。这些实验将为理解DDX3X在
在细胞和分子水平上的神经发生。重要的是,这项提议旨在给
小鼠遗传学、胚胎学、测序、组织学和
显微镜。本副刊还包括一份全面的职业指导计划
发展。
英文摘要
Abstract
De novo mutations in the RNA binding protein DDX3X result in DDX3X syndrome. DDX3X
mutations are also associated with autism spectrum disorder (ASD) and may account for 1-3% of
unexplained developmental delay (DD) in females. Yet, our understanding of DDX3X function in
the developing brain is limited. Our funded grant aims to understand the mechanisms by which
DDX3X loss of function and missense mutations perturb cellular function. This supplement will
focus on sexually dimorphic phenotypes linked to DDX3X. Most de novo mutations are in DDX3X
females though increasing numbers of cases in males have been observed. We have discovered
that complete loss of Ddx3x in females causes striking microcephaly. In contrast, complete
knockout in males phenocopies haploinsufficiency in females. Our data suggest that these
differences between males and females may be due to altered expression of the paralog, Ddx3y.
In this supplement, we will test the hypothesis that phenotypic differences in males and females
associated with Ddx3x loss are due to compensation by the paralog, Ddx3y. To test this, we will
use single cell transcriptomics to quantify cell composition and transcriptome changes associated
with Ddx3x loss in males and female embryonic brains. Additionally, we will use knockdown and
rescue experiments to test the functional redundancy of Ddx3y and Ddx3x for embryonic brain
development. These experiments will give valuable new insights to understand roles for Ddx3x in
neurogenesis at a cellular and molecular level. Importantly, this proposal is designed to give
fundamental experimental training in mouse genetics, embryology, sequencing, histology and
microscopy. This supplement also includes a comprehensive mentoring plan for career
development.
期刊论文(3)
专著(0)
科研奖励(0)
会议论文
Lysate and cell-based assays to probe the translational role of RNA helicases.
通过裂解物和基于细胞的检测来探测 RNA 解旋酶的翻译作用。
DOI:
10.1016/bs.mie.2022.03.032
发表时间:
2022
期刊:
Methods in enzymology
影响因子:
--
作者:
[Wilkins,KevinC, Venkataramanan,Srivats, Floor,StephenN]
通讯作者:
Floor,StephenN
DOI:
10.1261/rna.078926.121
发表时间:
2021-12
期刊:
RNA (New York, N.Y.)
影响因子:
--
作者:
[Venkataramanan S, Gadek M, Calviello L, Wilkins K, Floor SN]
通讯作者:
Floor SN
The molecular grammar of human RNA biology
-
批准号:10622907
-
项目类别:
-
资助金额:$36.34万
-
财政年份:2023
-
负责人:Stephen Nicholas Floor
-
依托单位:
Cellular and molecular mechanisms underlying DDX3X syndrome
-
批准号:10155248
-
项目类别:
-
资助金额:$67.81万
-
财政年份:2021
-
负责人:Stephen Nicholas Floor
-
依托单位:
Cellular and molecular mechanisms underlying DDX3X syndrome
-
批准号:10320963
-
项目类别:
-
资助金额:$66.28万
-
财政年份:2021
-
负责人:Stephen Nicholas Floor
-
依托单位:
Cellular and molecular mechanisms underlying DDX3X syndrome
-
批准号:10539256
-
项目类别:
-
资助金额:$65.64万
-
财政年份:2021
-
负责人:Stephen Nicholas Floor
-
依托单位:
海外基金