SOFTWARE CONVERTS RAW-TYPE FILES INTO DTA? AND MGF?FILES FOR DATABASE SEARCH

软件将 RAW 类型文件转换为 DTA？

• 批准号: 8361549
• 负责人: JULIO C PADOVAN
• 金额: $ 0.13万
• 依托单位: ROCKEFELLER UNIVERSITY
• 依托单位国家: 美国
• 财政年份: 2011
• 资助国家: 美国
• 起止时间: 2011-03-01 至 2012-03-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8361549
• 关键词: Adopted; Algorithms; Computer software; Data; Databases; Funding; Grant; Laboratories; National Center for Research Resources; Principal Investigator; Proteins; Research; Research Infrastructure; Resources; Source; United States National Institutes of Health; Writing; cost; file format; graphical user interface; macromolecule; mass spectrometer; programs; research study

This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. Primary support for the subproject and the subproject's principal investigator may have been provided by other sources, including other NIH sources. The Total Cost listed for the subproject likely represents the estimated amount of Center infrastructure utilized by the subproject, not direct funding provided by the NCRR grant to the subproject or subproject staff. A graphical user interface (GUI) was created for the program lcq_dta.exe to facilitate the use of the conversion software. The data conversion algorithm, lcq_dta.exe, converts data from raw file format generated by Finnigan's LCQ and LTQ mass spectrometers to files using the standard dta format. The latter format is universally adopted as the standard input type for database searches in protein identification experiments and it is used both by software written in our laboratory as well as by outside sources. The GUI is finished and in use.

这个子项目是利用资源的许多研究子项目之一。 由NIH/NCRR资助的中心拨款提供。对子项目的主要支持 子项目的首席调查员可能是由其他来源提供的， 包括美国国立卫生研究院的其他来源。为子项目列出的总成本可能 表示该子项目使用的中心基础设施的估计数量， 不是由NCRR赠款提供给次级项目或次级项目工作人员的直接资金。 为程序lcq_dta.exe创建了图形用户界面(GUI)，以方便转换软件的使用。数据转换算法lcq_dta.exe将由Finnigan的LCQ和LTQ质谱仪生成的原始文件格式的数据转换为使用标准DTA格式的文件。后一种格式被普遍采用为蛋白质鉴定实验中数据库搜索的标准输入类型，它既被我们实验室编写的软件使用，也被外部来源使用。图形用户界面已经完成，正在使用中。