Accelerate Adoption of Galaxy Pro in the Biomedical Research Marketplace
Accelerate Adoption of Galaxy Pro in the Biomedical Research Marketplace
批准号:
10045292
负责人:
Enis Afgan
金额:
$5.5万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-09-13 至 2020-06-30
关键词:
AddressAdoptionBasic ScienceBiological AssayBiomedical ResearchBusinessesCommunitiesComputer softwareComputersDataData AnalysesData Storage and RetrievalEnvironmentGalaxyGenerationsGoalsImprove AccessIndividualInnovation CorpsInstitutionLaboratoriesMainstreamingMethodsPainPhasePositioning AttributePrivatizationProcessProductionResearchResourcesRunningScienceServicesSmall Business Technology Transfer ResearchTrainingbasecollaborative environmentexperienceflexibilityopen sourceprecision medicineproduct developmentprogramstooltranslational medicineweb interfaceweb-accessible
中文摘要
项目摘要
Galactic Core LLC旨在开发一种强大、可扩展的托管服务,
生物医学数据分析该服务将基于流行的开源Galaxy应用程序
(https://galaxyproject.org/),提供无限的数据存储和计算能力,
强大、灵活、协作的数据分析环境。该服务将作为一组私有
为个人、研究小组或
机构职能体系生物医学科学中的数据生成分析和分析工具继续快速发展
和固定的一键数据分析方法非常具有挑战性,因为分析必须快速适应新的
数据的方法和类型。这种情况需要相应的巨大且不断增长的容量,
数据分析,可以很容易地定制到域,并与一系列外部资源集成。
银河凭借其可访问的网络界面和一个全球性的社区,在适应这一点方面具有独特的优势。
不断变化的格局,因为它提供了对超过6,500种最佳分析工具和超过100种数据类型的访问。这些
数量是任何类似解决方案都无法比拟的,但工具和数据类型的添加速度仍在继续
增加。然而,建立、维护和发展必要的数据分析的挑战
环境对生物医学数据分析构成障碍,特别是对小公司和实验室。的
我们的STTR第一阶段项目的目标是简化建立和管理生产质量
Galaxy实例,并将其作为可扩展、可管理、始终在线的服务提供。作为I-Corps计划的一部分,
我们将找出客户的痛点和收获,以更好地指导产品开发。我们这个项目的目标是
在我们开发此产品时,
产品市场匹配。强大的生物医学数据分析平台的广泛和简单可用性将
从根本上提高获取生物医学数据的分析能力,促进研究的常规分析
实验室和机构,小型企业,以及中型企业。
英文摘要
Project Summary
Galactic Core LLC aims to develop a robust, scalable, and managed service for performing enterprise-grade
biomedical data analysis. The service will be based on the popular open-source Galaxy application
(https://galaxyproject.org/), offering unlimited data storage and compute capabilities with an extremely
powerful, flexible, and collaborative environment for analyzing data. The service will be run as a set of private
environments with dedicated computers being setup and managed for individuals, research groups, or
institutions. Data generation assays and analysis tools in the Biomedical Sciences continue to evolve rapidly
and fixed 1-click approach to data analysis is very challenging as the analysis must be quickly adapted to new
methods and types of data. This landscape requires a proportionally vast and growing amount of capacity for
data analysis that can be readily tailored to the domain and integrates with an array of external resources.
Galaxy with its accessible web-interface and a worldwide community is uniquely positioned to adapt to this
changing landscape as it provides access to >6,500 best-of-breed analysis tools and >100 data types. These
numbers are unmatched by any similar solution, yet the rate at which tools and data types are added continues
to increase. However, the challenges with setting up, maintaining, and evolving the necessary data analysis
environment present an obstacle for biomedical data analysis, particularly for small firms and laboratories. The
goal of our STTR Phase I project is to streamline the process of setting up and managing a production-quality
instance of Galaxy and deliver it as a scalable, managed, always-on service. As part of this I-Corps program,
we will identify customer pains and gains to better stear product development. Our goal for this program is to
gain training and experience with customer discovery and business management as we develop this
product-market fit. Broad and simple availability of a powerful biomedical data analysis platform would
fundamentally improve access to biomedical data analysis capacity and facilitate routine analyses by research
labs and institutions, small businesses, as well as mid-sized corporations.
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An Integrative and Collaborative Genomic Data Analysis Service with Galaxy
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批准号:9909029
-
项目类别:
-
资助金额:$22.5万
-
财政年份:2019
-
负责人:Enis Afgan
-
依托单位:
Expanding the AnVIL (Analysis, Visualization, and Informatics Lab-space)
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批准号:10748042
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项目类别:
-
资助金额:$308.81万
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财政年份:2018
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负责人:Enis Afgan
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依托单位:
海外基金