Malposed Semilunar Valves in Double Outlet Right Ventricle - A Pilot Genetic Analysis
Malposed Semilunar Valves in Double Outlet Right Ventricle - A Pilot Genetic Analysis
批准号:
10064589
负责人:
Ram Kumar Subramanyan
金额:
$8.25万
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
已结题
起止时间:
2020-08-01 至 2022-07-31
关键词:
Animal ModelAnteriorAortaArteriesCardiacCellsCessation of lifeChildChild CareClassificationClinicalClinical DataComplexCongenital AbnormalityDNA Sequence AlterationDataDefectDevelopmentDevelopmental BiologyDiagnosisDouble Outlet Right VentricleEmbryoEngineeringEvaluationEventExhibitsFGF8 geneFetal HeartGeneticGenetic studyGenotypeGoalsGrantHeartHeart AbnormalitiesHumanInheritance PatternsInstitutesKnock-outLaboratoriesLeftLesionLungMediatingModelingMolecularMusMutationNational Heart, Lung, and Blood InstitutePathway interactionsPatientsPediatric Cardiac Genomics ConsortiumPhenocopyPhenotypePlant RootsPolygenic TraitsPopulationPositioning AttributeProtocols documentationPulmonary valve structureResearchResearch PersonnelRotationScientistSideSignal PathwaySignal TransductionSurgeonSurgical ManagementSystemTimeTranslational ResearchVariantWorkbasecardiogenesisclinical phenotypeclinical practiceclinically relevantcongenital heart disorderexomeexome sequencinggenetic analysisgenomic datahuman datamouse modelnovelpatient populationpatient subsetsprobandsemilunar valvestem cellssurgery outcometranscriptome sequencingtranslational genomics
中文摘要
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英文摘要
During development, the cardiac outflow tract (OFT) arises primarily from progenitor cells in the so-called
second heart field (SHF) and OFT defects are seen in nearly 30% of all congenital heart disease. Traditionally,
OFT maturation has been modeled as three distinct events – septation, alignment and rotation. Double outlet
right ventricle (DORV) results when the OFT fails to appropriately align itself such that systemic and pulmonary
outflows can exit from the respective ventricles. Although several animal models have been proposed to study
the molecular basis for DORV, these models have failed to sufficiently explain simultaneous alignment and
rotation of the OFT, and as such do not faithfully phenocopy the spectrum of DORV seen in the clinical setting.
Clinically, DORV presents as a spectrum of abnormalities with associated defects in great vessel orientation -
ranging from the tetralogy-type DORV with normally related great arteries (NRGA) to transposition-type DORV
with malposed great arteries (MGA). Surgical management and outcomes are vastly different between these
two types and, hence, studying the underlying unique molecular defects is of intrinsic scientific merit. The
accompanying proposal seeks to utilize genetic mutations identified in children with DORV to inform mutations
seen in a novel mouse model of DORV. The PI has access to clinical and whole exome data from the PCGC of
patients with DORV, which will be analyzed to identify genotype-phenotype correlation with DORV/NRGA vs.
MGA. The PI's lab has established a unique mouse model of DORV, wherein Isl-Cre driven DLL4f/wt mice
exhibit DORV/NRGA, whereas the addition of partial knockout of FGF8 results in DORV/MGA. This system
provides the opportunity to utilize a polygenic inheritance pattern to model clinically relevant DORV phenotypic
variants. RNA-seq analysis from these two lesion sets will be used to identify murine mutations. Superimposing
human and murine data will pave way for the understanding of relevant pathways for subsequent analyses.
Given that the PI is a practicing congenital heart surgeon and a cardiac developmental biology researcher, a
key strength of this proposal is the utilization of human data to inform the analysis in a novel mouse model.
The conceptual approach is driven by the PI’s clinical expertise in caring for children with DORV, which has
also provided the ability to study genetic mutations stratified by clinical phenotype. The laboratory aspect of
this project naturally builds upon on the PI’s established expertise studying DLL4 signaling in OFT
development, and utilizes a model of DORV set up as part of a K08 grant from NHLBI. In addition, the proposal
enjoys the support of USC’s Institute of Translational Genomics, which has a robust platform to undertake the
kind of genetic analysis proposed in this study. In the spirit of the R03 mechanism, this pilot work seeks to
analyze genetic data from pre-existing clinical exome sequences and from established mouse embryos.
Successful completion of this work will provide a platform for more robust and clinically relevant evaluation of
OFT alignment and rotation paving way for a larger R01 application.
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Malposed Semilunar Valves in Double Outlet Right Ventricle - A Pilot Genetic Analysis
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批准号:10225626
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项目类别:
-
资助金额:$8.25万
-
财政年份:2020
-
负责人:Ram Kumar Subramanyan
-
依托单位:
Role of delta-like ligand-4 signaling in cardiac outflow tract development
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批准号:9034462
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项目类别:
-
资助金额:$16.86万
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财政年份:2016
-
负责人:Ram Kumar Subramanyan
-
依托单位:
Role of delta-like ligand-4 signaling in cardiac outflow tract development
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批准号:9203631
-
项目类别:
-
资助金额:$16.86万
-
财政年份:2016
-
负责人:Ram Kumar Subramanyan
-
依托单位:
海外基金