Investigating chromatin-based mechanisms of astrocyte pathology during inflammation response and stress-induced behaviors
Investigating chromatin-based mechanisms of astrocyte pathology during inflammation response and stress-induced behaviors
批准号:
10246177
负责人:
Sasha Fulton
金额:
$1.0万
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
已结题
起止时间:
2020-08-14 至 2021-08-23
关键词:
ATAC-seqAffectAffectiveAffinity ChromatographyAnhedoniaAnimalsAnxietyAstrocytesAutomobile DrivingAutopsyBacteriaBehaviorBehavioralBindingBinding SitesBiological AssayBrain regionCell NucleusCell physiologyCellsChIP-seqChromatinChromatin Remodeling FactorChronicClinicalComplexControl AnimalCoupledCultured CellsDNA-Binding ProteinsDataData SetDecision MakingDiseaseEpigenetic ProcessFellowshipFemaleFluorescenceFunctional disorderGene ExpressionGene TargetingGenesGeneticGenetic TranscriptionGenomic SegmentGoalsHumanInflammationInflammatoryInflammatory ResponseInvestigationLaboratoriesLaboratory ResearchLentivirus VectorMajor Depressive DisorderMeasuresMediatingMental disordersMentorshipMessenger RNAMethodsMolecularMorphologyMusNF-kappa BNeurogliaNeuronsNuclearPathogenicityPathologicPathologyPathway interactionsPhenotypePopulationPredispositionProcessProteinsRegulationRegulatory ElementResearch PersonnelRewardsRibosomesRodent ModelRoleSalineSignal TransductionSorting - Cell MovementStressSucroseSymptomsSystemTechniquesTestingTherapeuticTherapeutic AgentsTissuesTrainingTranscriptional RegulationTranslatingTransposaseUp-RegulationViral Vectorbasebehavioral phenotypingcareercell cortexcell typecellular transductionchromatin remodelingepigenetic regulationexperimental studygenetic regulatory proteingenome-wideinsightknock-downmalemolecular phenotypemouse modelneuroinflammationneurotransmissionnoveloverexpressionpre-clinicalpreferenceresponsesocialsocial defeatsocial stresstargeted treatmenttranscription factortranscriptome sequencingvector
中文摘要
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英文摘要
Although MDD has been predominantly studied in the context of neuronal function, emerging evidence indicates
that dysregulation of glia may be equally important – particularly during chronic neuroinflammation in response
to stress, which is known to contribute to the pathophysiology of MDD. However, the cell-type specific
transcriptional dynamics driving these processes remain unclear because traditional epigenetic chromatin
accessibility profiling methods are not compatible with cell-type specific approaches. Our laboratory has recently
implemented the newly developed technique FANS (Fluorescence-Activated Nuclear Sorting)-coupled ATAC-
seq (Assay for Transposase-Accessible Chromatin-Sequencing) to profile the cell type-specific regulatory
landscape in human MDD in orbitofrontal cortex (OFC), a brain region that processes reward-based decision-
making and may mediate anhedonic symptoms in MDD. Interestingly, we only detected MDD-specific open
chromatin regions (OCRs) in the glial, but not the neuronal OFC cell population. Gene set analyses of MDD-
specific OCRs showed significant enrichment of astrocyte-specific genes regulating NF-KB inflammation
response. Using motif discovery, I identified ZBTB7A, a chromatin remodeling protein with recognition
sequences significantly overrepresented in MDD-specific OCRs. Recently, ZBTB7A has been shown to
orchestrate chromatin accessibility for a distinct subset of delayed induction NF-Kb target genes, suggesting that
ZBTB7A may regulate the transduction of chronic NF-Kb stress signals from adaptive to pathological. My pilot
data has shown that ZBTB7A is upregulated in the OFC of both human MDD and in OFC astrocytes of a
preclinical chronic social defeat stress (CSDS) mouse model, as well as in cultured murine primary astrocytes
treated with LPS (a compound which induces NF-KB and inflammation). Given these preliminary data, I
hypothesize that upregulation of ZBTB7A in OFC astrocytes acts as a pathogenic driver of pro-
inflammatory NF-Kb activation in MDD through modulation of chromatin accessibility at key downstream
target genes, leading to MDD-related behavioral deficits. In Aim 1, I will characterize the basic mechanisms
of manipulating this chromatin remodeler at baseline and during inflammation stress by manipulating ZBTB7A
levels in a cultured human primary astrocyte system, then treating with LPS or saline followed by assessment of
astrocyte reactivity (IHC), chromatin accessibility (via ATAC-seq), epigenetic regulation (ChIP-seq) and gene
expression (RNA-seq). In Aim 2, I will explore the therapeutic potential of targeting Zbtb7a by using novel
astrocyte-specific viral vectors to determine if Zbtb7a is necessary and sufficient in the OFC to affect vulnerability
to inflammation stress-induced behavioral deficits in a preclinical mouse model of social defeat stress. Together
these experiments will offer enormous potential for new mechanistic insights into disease pathology in the
context of a relatively understudied cell-type, astrocytes, in neuroinflammation and stress.
期刊论文(1)
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科研奖励(0)
会议论文
Characterizing effects of OFC astrocyte plasticity in inflammation response and stress vulnerability with single-cell resolution
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批准号:10393087
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项目类别:
-
资助金额:$4.54万
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财政年份:2021
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负责人:Sasha Fulton
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依托单位:
Defining the Differential Role of Mrgprb4+ Social Touch Somatosensory Neurons in Pain Modulation and Frontolimbic Dysregulation During Chronic Inflammatory Pain
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批准号:10795115
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项目类别:
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资助金额:$8.53万
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财政年份:2021
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负责人:Sasha Fulton
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依托单位:
海外基金