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Role of VZV Latency Transcript (VLT) and ORF63 in latency and reactivation

VZV 潜伏转录本 (VLT) 和 ORF63 在潜伏和重新激活中的作用

基本信息

批准号：
10570901
负责人：
Paul R. Kinchington
金额：
$ 71.33万
依托单位：
UNIVERSITY OF PITTSBURGH AT PITTSBURGH
依托单位国家：
美国
项目类别：
财政年份：
2020
资助国家：
美国
起止时间：
2020-11-17 至 2025-10-31
项目状态：
未结题

来源：
https://reporter.nih.gov/project-details/10570901
关键词：
Ablation Address Affect Afferent Neurons Animal Model Apoptosis Autopsy Binding Biology Blindness Cadaver Chickenpox Chromatin Chronic Clinical Code Detection Development Disease Elderly Elements FDA approved Ganglia Gene Expression Genes Genetic Transcription Genomics Goals Herpes zoster disease Herpesviridae Herpesvirus Type 3 Histones Homologous Gene Human In Situ In Vitro Infection Intervention Knowledge Lytic Lytic Phase Lytic Virus Maintenance Maps Methods Modeling Modification Molecular Mutation Myocardial Infarction Neurons Open Reading Frames Orthologous Gene Pain Phosphorylation Population Positioning Attribute Predisposition Process Promoter Regions Proteins Quality of life RNA RNA Polymerase II RNA Splicing Recombinants Research Personnel Role Simplexvirus Site Societies Stroke Structure of trigeminal ganglion System Testing Therapeutic Trans-Activators Transcript Vaccines Viral Viral Drug Resistance Viral Genes Viral Genome Virus Virus Diseases Virus Latency Work Zoster Vaccine chromatin immunoprecipitation chromatin modification debilitating pain design gene function genetic regulatory protein histone methylation human data human embryonic stem cell human pathogen insight latency associated transcript latent infection mutant nerve stem cell neurotropic novel novel therapeutic intervention promoter reactivation from latency viral RNA

项目摘要

Varicella-zoster virus (VZV), a human alpha herpesvirus (αHV), establishes lifelong latent infection in ganglionic neurons of >90% humans worldwide, reactivating in one-third to cause herpes zoster (HZ), debilitating pain and stroke. How VZV maintains latency remains unclear. Despite the availability of two FDA-approved HZ vaccines, it is likely that HZ will remain a common and clinically important disease for many years to come. Currently, the VZV latent state is resistant to antiviral targeting, and the triggers of reactivation remain poorly defined. We argue that better knowledge of VZV latency and reactivation will establish the basis for new anti- VZV strategies to reduce the HZ burden. There is no appropriate animal model to study VZV latency and reactivation. To study these processes, our groups pioneered the study of naturally VZV-infected human trigeminal ganglia (TG) and a human embryonic stem cell (hESC)-derived cultured neuron model. We discovered the consistent detection of a novel spliced VZV RNA in human TG, the VZV latency-associated transcript (VLT), which has a genomic position similar to that in other neurotropic αHVs and is antisense to the VZV transactivator from open reading frame 61 (ORF61, ortholog of HSV ICP0). Notably, VLT encodes a protein of unknown function. Human TG also contains ORF63 RNAs, whose protein has roles in regulating viral gene expression and blocking apoptosis. Our overlying hypothesis is that VLT is important for VZV neuronal infection and the latent state, whereas ORF63 is involved in the initiation of reactivation. Our three specific aims are designed to address the VZV latent state genes in both cadaveric human TG and cultured neuron models of VZV latency and reactivation. In Specific Aim 1, we will perform in-depth in situ analyses of latently VZV-infected human TG and VZV-infected cultured hESC neurons to determine if specific human neuron subtypes host VZV latency and reactivation. In Specific Aim 2, we will dissect the mechanisms by which the VLT transcript and/or its encoding protein contribute to lytic, latent and reactivated VZV infections, by making several recombinant VZV VLT mutants and evaluating them in our hESC-derived neuron platform. Finally, Specific Aim 3 will determine the molecular chromatin modifications occurring at the VLT and ORF63 loci during VZV latency and reactivation in both human TG and hESC neurons, using chromatin immunoprecipitations to analyze CTCF binding, phospho/methyl switch of histone protein 3 and paused RNA polymerase II on VZV genomes. By sharing our complementary materials, methods and longstanding expertise in VZV biology, we are now uniquely positioned to characterize VZV latency ex vivo and systematically analyze the function of VLT and its encoded protein in vitro. Successful completion of our proposal will provide insight into molecular mechanisms that regulate VZV latency and reactivation. This will provide leads towards the development of novel intervention strategies that effectively target latent VZV and consequently the burden of HZ disease.

水痘-带状疱疹病毒（VZV）是一种人类α疱疹病毒（αHV），在全世界超过90%的人类神经节神经元中建立终身潜伏感染，在三分之一的人中重新激活，引起带状疱疹（HZ），使人衰弱的疼痛和中风。VZV如何保持延迟仍不清楚。尽管有两种FDA批准的HZ疫苗可用，但HZ很可能在未来许多年内仍将是一种常见的临床重要疾病。目前，VZV潜伏状态对抗病毒靶向具有抗性，并且再激活的触发因素仍然不清楚。我们认为，更好地了解VZV潜伏期和再激活将建立新的抗VZV策略的基础，以减少HZ负担。目前还没有合适的动物模型来研究VZV的潜伏期和再激活。为了研究这些过程，我们的团队率先研究了自然VZV感染的人三叉神经节（TG）和人胚胎干细胞（hESC）衍生的培养神经元模型。我们在人TG中发现了一种新的剪接VZV RNA，即VZV潜伏相关转录物（VLT），其基因组位置与其他嗜神经性α HV相似，并且与VZV开放阅读框61（ORF 61，HSV ICP 0的直系同源物）的反式激活因子反义。值得注意的是，VLT编码未知功能的蛋白质。人TG还含有ORF 63 RNA，其蛋白具有调节病毒基因表达和阻断细胞凋亡的作用。我们的假设是，VLT是重要的VZV神经元感染和潜伏状态，而ORF 63参与启动的再激活。我们的三个具体目标是解决VZV潜伏状态基因在尸体人TG和培养的神经元模型VZV潜伏期和再激活。在特定目标1中，我们将对潜伏性VZV感染的人TG和VZV感染的培养hESC神经元进行深入的原位分析，以确定特定的人神经元亚型是否具有VZV潜伏期和再激活。在具体目标2中，我们将通过制造几种重组VZV VLT突变体并在我们的hESC衍生的神经元平台中对其进行评估，来剖析VLT转录物和/或其编码蛋白有助于裂解、潜伏和再活化VZV感染的机制。最后，特定目标3将确定在VZV潜伏期和人TG和hESC神经元中的再激活期间在VLT和ORF 63位点发生的分子染色质修饰，使用染色质免疫沉淀分析CTCF结合、组蛋白3的磷酸/甲基开关和VZV基因组上暂停的RNA聚合酶II。通过分享我们在VZV生物学方面的互补材料、方法和长期专业知识，我们现在处于独特的地位，能够体外表征VZV潜伏期，并系统地分析VLT及其编码蛋白的功能。成功完成我们的提案将提供深入了解调节VZV潜伏期和再激活的分子机制。这将为开发新的干预策略提供线索，这些策略有效地针对潜伏的VZV，从而减轻HZ疾病的负担。