The function of H3K23me3, a transgenerationally inherited heterochromatin mark

项目总结:

PROJECT SUMMARY: H3K23 methylation is an evolutionarily conserved but understudied heterochromatic histone modification whose function is unknown. In the past year our lab used C. elegans to study H3K23 methylation and found that it plays a role in nuclear RNAi. Nuclear RNAi is an evolutionarily conserved pathway in which small interfering RNAs (siRNAs) guide chromatin modifications and transcriptional repression. It protects the host genome by epigenetically silencing transposons and other “non-self” DNA. We have made the following discoveries: (1) H3K23me3 is induced by nuclear RNAi and is inherited for four generations. (2) The histone methyltransferase SET-32, methylates H3K23 in vitro. (3) Both set-32 and the nuclear RNAi effector protein, hrde-1, are required for nuclear RNAi-induced H3K23me3 in vivo. These discoveries have raised new questions. What are the other histone methyltransferases responsible for H3K23me3? What is the function of H3K23me3? Could H3K23me3 contribute to transcriptional silencing in nuclear RNAi? In this proposal I will take genetic, biochemical, and computational approaches to address these questions in the following aims. (1) Biochemically characterize and identify the histone methyltransferase(s) responsible for this modification. (2) Create a functional knockout of H3K23me3 using a dominant negative mutation first discovered in cancer. (3) Study the function of H3K23me3 in nuclear RNAi. The proposed studies, which explore a fundamental yet unmapped territory of modern biology, will advance our understanding of the histone code, histone methyltransferases, oncogenic histones, RNA-mediated transcriptional silencing, and RNA-chromatin interaction, which are all relevant to human development and disease.