Reactivity of Manganese and Iron Metalloenzyme Models
Reactivity of Manganese and Iron Metalloenzyme Models
批准号:
10624814
负责人:
David P Goldberg
金额:
$29.06万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2013
资助国家:
美国
项目状态:
已结题
起止时间:
2013-09-01 至 2024-05-31
关键词:
Active SitesAddressAnabolismBindingBiological ProcessBiomimeticsCarbonCatalysisCell NucleusChargeChloride PeroxidaseComplementComplexContractsCoupledCytochrome P450DiagnosticDioxygenDioxygenasesDiseaseDissociationDrug Metabolic DetoxicationElectron TransportElectronicsEnergy TransferEnzymesEventExhibitsFamilyFree EnergyFundingGoalsHalogensHealthHemeHemeproteinsHumanHydrocarbonsHydrogen BondingHydrogen PeroxideHydroxyl RadicalIndolesIronKineticsLearningLigandsLigationManganeseMeasuresMediatingMetabolismMetalsMethodologyMethodsModelingModificationNatureOutcomeOxidantsOxidation-ReductionOxygenPathway interactionsPatternPlayPorphyrinsProcessPropertyProteinsProtonsReactionResearchRoleSeriesStructureStructure-Activity RelationshipSystemTechniquesTherapeuticThermodynamicsTimeTryptophanTryptophan 2,3 DioxygenaseTryptophanaseWorkadductanalogcatalystcofactorcold temperaturecomputer studiescorroledesignelectronic structureenzyme mechanismfeasibility testingknowledge basemetalloenzymenoveloxidationprogramssmall moleculestop flow technique
中文摘要
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英文摘要
Project Summary
Heme proteins participate in many essential biological processes that are important to human health and
disease, and they are targets of both diagnostic and therapeutic treatments. An important subset of these
proteins are enzymes that activate dioxygen (O2) or its reduced analogs (e.g. H2O2). These enzymes utilize the
same iron cofactor to mediate a wide range of reactions, including mono- and dioxygenation of organic
substrates, C-H activation, desaturation, and C-C bond cleavage. How nature tunes the metal center and active
site of these enzymes to mediate such a wide range of functionality is a question of fundamental significance
that continues to motivate significant research. This proposal focuses on the synthesis and reactivity of small-
molecule model complexes of key intermediates, and their related bond-making/bond-breaking events, proposed
in the mechanisms of the thiolate-ligated heme enzymes Cytochrome P450 (CYP), chloroperoxidase (CPO), and
aromatic peroxygenase (APO), and the non-thiolate-ligated heme dioxygenases tryptophan-2,3-dioxygenase
(TDO) and indoleamine-2,3-dioxygenase (IDO). The thiolate-ligated heme enzymes are capable of oxidizing
hydrocarbon C-H bonds, and the proposed mechanism involves H-atom transfer (HAT) (proton-coupled electron-
transfer, PCET) from R-H to an intermediate called Compound-I (Fe=O), followed by hydroxyl transfer
(“rebound”) from protonated Compound-II (Fe-OH) to give the ROH product. However, the rebound step can be
diverted to other pathways, leading to distinctly different reaction outcomes. Many questions remain regarding
the fundamental structural, electronic, thermodynamic and kinetic factors that control both HAT and rebound
steps. In contrast, TDO/IDO are proposed to rely on an Fe(O2) adduct and Compound-II as active oxidants,
although much remains to be learned about this mechanism. Efforts in this proposal will address these questions
through the synthesis and study of biomimetic M=O, M-OH, and M-O2 species that will be prepared with tailored
porphyrinoid ligands designed to stabilize these species and allow for their direct study. These ligands include
ring-contracted corroles (Crl) and corrolazines (Cz), which have a modified porphyrin nucleus which presents a
trianionic (3-) charge to the metal, similar to a thiolate-ligated heme active site. Our previous efforts showed that
the Crl and Cz platforms provide access to novel species not seen with conventional porphyrins, including a
Cpd-I analog with the same spin ground state as found in CYP and CPO, and the first example of a protonated
Cpd-II model. Systematic modifications can be made to these small-molecule models through established
synthetic methodologies, providing atomic-level control over their geometric/electronic structures, and providing
a means to establish structure-function relationships that can be challenging or impossible to obtain when
studying the enzymes alone. The long-term goals of the proposed work are: 1) to address fundamental
questions related to heme enzyme reactivity and mechanism, and 2) to build the knowledge base
regarding synthetic porphyrinoid complexes for applications in small-molecule activation and catalysis.
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DOI:
10.1002/chem.201404349
发表时间:
2014-11-03
期刊:
CHEMISTRY-A EUROPEAN JOURNAL
影响因子:
4.3
作者:
[Neu, Heather M., Quesne, Matthew G., Yang, Tzuhsiung, Prokop-Prigge, Katharine A., Lancaster, Kyle M., Donohoe, James, DeBeer, Serena, de Visser, Sam P., Goldberg, David P.]
通讯作者:
Goldberg, David P.
DOI:
10.1021/acs.accounts.5b00273
发表时间:
2015-10-20
期刊:
Accounts of chemical research
影响因子:
18.3
作者:
[Neu HM, Baglia RA, Goldberg DP]
通讯作者:
Goldberg DP
Rhenium(V)-oxo corrolazines: isolating redox-active ligand reactivity.
铼(V)-氧代科罗嗪:隔离氧化还原活性配体反应性。
DOI:
10.1039/c5cc07956j
发表时间:
2016
期刊:
Chemical communications (Cambridge, England)
影响因子:
--
作者:
[Zaragoza,JanPauloT, Siegler,MaximeA, Goldberg,DavidP]
通讯作者:
Goldberg,DavidP
DOI:
10.1021/acs.accounts.8b00414
发表时间:
2018-11-20
期刊:
Accounts of chemical research
影响因子:
18.3
作者:
[Sacramento JJD, Goldberg DP]
通讯作者:
Goldberg DP
Oxidation of an indole substrate by porphyrin iron(iii) superoxide: relevance to indoleamine and tryptophan 2,3-dioxygenases.
卟啉铁 (iii) 超氧化物对吲哚底物的氧化:与吲哚胺和色氨酸 2,3-双加氧酶的相关性。
DOI:
10.1039/c9cc10019a
发表时间:
2020
期刊:
Chemical communications (Cambridge, England)
影响因子:
--
作者:
[Sacramento,JirehJoyD, Goldberg,DavidP]
通讯作者:
Goldberg,DavidP
共 21 条
Heme and Nonheme Transition Metal Complexes, Reactivity, and Mechanism
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批准号:10623095
-
项目类别:
-
资助金额:$18.05万
-
财政年份:2023
-
负责人:David P Goldberg
-
依托单位:
Synthetic Nonheme Iron O2 Activation and S-Oxygenation
-
批准号:10809294
-
项目类别:
-
资助金额:$1.59万
-
财政年份:2016
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负责人:David P Goldberg
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依托单位:
Synthetic Nonheme Iron O2 Activation and S-Oxygenation
-
批准号:9929886
-
项目类别:
-
资助金额:$21.18万
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财政年份:2016
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负责人:David P Goldberg
-
依托单位:
Synthetic Nonheme Iron O2 Activation and S-Oxygenation
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批准号:10218201
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项目类别:
-
资助金额:$35.81万
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财政年份:2016
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负责人:David P Goldberg
-
依托单位:
Synthetic Nonheme Iron O2 Activation and S-Oxygenation
-
批准号:10389327
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项目类别:
-
资助金额:$12.48万
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财政年份:2016
-
负责人:David P Goldberg
-
依托单位:
Synthetic Nonheme Iron O2 Activation and S-Oxygenation
-
批准号:10426248
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项目类别:
-
资助金额:$35.94万
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财政年份:2016
-
负责人:David P Goldberg
-
依托单位:
Synthetic Nonheme Iron O2 Activation and S-Oxygenation
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批准号:10671670
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项目类别:
-
资助金额:$35.63万
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财政年份:2016
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负责人:David P Goldberg
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依托单位:
Synthetic Nonheme Iron O2 Activation and S-Oxygenation
-
批准号:9203896
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项目类别:
-
资助金额:$38.0万
-
财政年份:2016
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负责人:David P Goldberg
-
依托单位:
Reactivity of Manganese and Iron Metalloenzyme Models
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批准号:9068158
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项目类别:
-
资助金额:$29.33万
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财政年份:2013
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负责人:David P Goldberg
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依托单位:
Reactivity of Manganese and Iron Metalloenzyme Models
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批准号:10442664
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项目类别:
-
资助金额:$29.12万
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财政年份:2013
-
负责人:David P Goldberg
-
依托单位:
Reactivity of Manganese and Iron Metalloenzyme Models
-
批准号:8852634
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项目类别:
-
资助金额:$29.4万
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财政年份:2013
-
负责人:David P Goldberg
-
依托单位:
Reactivity of Manganese and Iron Metalloenzyme Models
-
批准号:9402926
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项目类别:
-
资助金额:$29.34万
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财政年份:2013
-
负责人:David P Goldberg
-
依托单位:
Reactivity of Manganese and Iron Metalloenzyme Models
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批准号:8714004
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项目类别:
-
资助金额:$29.46万
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财政年份:2013
-
负责人:David P Goldberg
-
依托单位:
Reactivity of Manganese and Iron Metalloenzyme Models
-
批准号:9273159
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项目类别:
-
资助金额:$11.73万
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财政年份:2013
-
负责人:David P Goldberg
-
依托单位:
Reactivity of Manganese and Iron Metalloenzyme Models
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批准号:10296952
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项目类别:
-
资助金额:$30.76万
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财政年份:2013
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负责人:David P Goldberg
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依托单位:
Reactivity of Manganese and Iron Metalloenzyme Models
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批准号:9766308
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项目类别:
-
资助金额:$29.29万
-
财政年份:2013
-
负责人:David P Goldberg
-
依托单位:
Reactivity of Manganese and Iron Metalloenzyme Models
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批准号:8439024
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项目类别:
-
资助金额:$29.52万
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财政年份:2013
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负责人:David P Goldberg
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依托单位:
Synthetic Models of N/S-Ligated Metal Centers in Biology
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批准号:7922428
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项目类别:
-
资助金额:$4.41万
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财政年份:2009
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负责人:David P Goldberg
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依托单位:
MIXED N,S-METAL COMPLEXES AS MODELS FOR METALLOHYDROLASE
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批准号:6876128
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项目类别:
-
资助金额:$17.79万
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财政年份:2001
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负责人:David P Goldberg
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依托单位:
Synthetic Models of N/S-Ligated Metal Centers in Biology
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批准号:7317911
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项目类别:
-
资助金额:$29.68万
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财政年份:2001
-
负责人:David P Goldberg
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依托单位:
海外基金