Elucidating a novel function for slco1a2, an organic anion transporter, in left-right patterning and cardiac development
Elucidating a novel function for slco1a2, an organic anion transporter, in left-right patterning and cardiac development
批准号:
9122754
负责人:
Dipankan Bhattacharya
金额:
$2.83万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2016
资助国家:
美国
项目状态:
已结题
起止时间:
2016-09-16 至 2019-09-15
关键词:
AdultAffectAllelesAmino AcidsBindingBiological ModelsBlood - brain barrier anatomyCandidate Disease GeneCardiac developmentCaringCellsChildCocosConfocal MicroscopyCongenital AbnormalityCopy Number PolymorphismDataData SetDefectDevelopmentDevelopmental BiologyDiseaseDisease OutcomeDisease modelDistalEmbryoEmbryonic DevelopmentEnterocytesEtiologyFoundationsFutureGene ExpressionGenesGeneticGenetic CounselingGenetic screening methodGenomicsGenotypeGoalsHeart AbnormalitiesHeterogeneityIn Situ HybridizationInfant MortalityKnock-outKnowledgeLateralLeadLeftLifeLive BirthMentorshipMesodermMessenger RNAMolecularMorbidity - disease rateMutateNephronsOrganOrganic Anion TransportersPathogenesisPatientsPatternPerioperativePharmaceutical PreparationsPhenotypePhosphorylationPhysiciansPlayProteinsRanaResearchResearch TrainingRoleScientistSeriesSideSignal TransductionSitus InversusTechniquesTechnologyTestingTimeTissuesTrainingWorkWritingXenopusapical membranebasecardiogenesiscareercholangiocytecongenital heart disorderdevelopmental diseasedisease phenotypeexperiencegenetic analysishuman diseasehuman genomicsimprovedimproved outcomeindividualized medicineknock-downloss of functionmolecular markermortalitynovelprotein functionprotein transportpublic health relevanceresearch studyselective expressionskillssolutetechnique developmenttranscriptome sequencing
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英文摘要
DESCRIPTION (provided by applicant): Congenital Heart Disease (CHD) is the most common birth defect affecting approximately 1% of all live births in the US and is one of the leading causes of infant mortality. A severe form of CHD can result from Heterotaxy (Htx), a disorder of Left-Right (LR) patterning during embryonic development. A recent genetic analysis of heterotaxy patients identified a novel CHD candidate gene, slco1a2. Slco1a2 encodes the organic anion transporter Oatp1a2, which is important for the transport of various endogenous molecules as well as drugs across the apical membrane. However, it has no known role in LR patterning or embryonic development. Using different knockdown/knockout strategies in the high-throughput human disease model, Xenopus, loss of slco1a2 leads to LR patterning defects, recapitulating the patient's phenotype. The overall goal of this proposal is to investigat the molecular mechanism by which slco1a2 affects LR patterning and heart development in the Xenopus (frog) model system. The first aim will use loss of function experiments to determine the required role of slco1a2 during cardiac development and then, by testing molecular markers, investigate at which step in the LR patterning cascade the gene plays a role. The second aim will investigate the spatial-temporal expression of slco1a2 mRNA in the whole embryo and examine the protein's sub-cellular localization in those tissues/times. The third aim will determine if the protein's known transport function is important for its role in LR patterning and cardiac development by mutating critical amino acid residues that affect the protein's ability to transport specific substrates. Altogether, these experiments will improve our understanding of cardiac development and the role of slco1a2 in the pathogenesis of CHD. In the future, this will benefit genetic testing and counseling, as well as improve outcomes in CHD because treatments can be tailored to genotype rather than solely on CHD phenotype. In addition, this application details the applicant's training plan including research mentorship, advanced coursework, training in new techniques, and the development of skills in scientific professionalism, writing, and presentation of data. The research and training outlined in this application will prepare the applicant to pursue a career performing patient-driven research as an independent physician- scientist.
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