Molecular Plant-Virus Interactions: Defense and Counter-defense

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Viral pathogens account for the largest proportion of newly emerging plant diseases and threaten global food security. To combat viruses, plants have evolved sophisticated defense mechanisms. In response, viruses have also evolved virulence strategies to counteract host defense. The long-term goal of our research program is to understand the complex virus-plant interactions, in particular the co-evolutionary arms race between viruses and plants, for the development of novel technologies to control viral diseases for sustainable crop production. An increasing body of evidence suggests that RNA-targeted immunity, which embraces RNA silencing, RNA decay and RNA quality control and regulates endogenous gene expression, is a central defense to viral pathogens in plants. These RNA immunity pathways may act in a hierarchical and concerted mode to inhibit virus infection with RNA silencing as a master player. RNA silencing, triggered by double-stranded RNA, is a fundamental, sequence-specific mechanism conserved in all eukaryotes. Viruses encode viral suppressors of RNA silencing (VSRs) that bind to cellular factors to cope with RNA silencing. Recently, we have found that VSRs also subvert RNA decay through interactions with key cellular decay pathway components to promote viral infection and autophagy plays contrasting roles (predominantly antiviral) in virus infection by regulating VSRs. As VSRs are highly diverse in sequence, they appear to interact with host proteins to execute their function. In this proposed research, we will identify host proteins that are recruited via interactions with VSRs to function specifically for RNA-targeted antiviral immunity rather than for endogenous gene regulation. We will further characterize their mechanistic details in the resistance-signaling pathway and elucidate how viruses interfere the antiviral function of these cellular factors using classical, molecular and cell biology techniques. Another emerging crucial antiviral defense is host factor-mediated recessive resistance. The vast majority of plant viruses have a small positive-sense, single-stranded RNA genome with very limited coding capacity. Thus, the invading virus depends on a number of host factors to establish its infection and disruption of the host factor-virus interaction leads to genetic resistance. Among a number of host factors identified so far, the eukaryotic translation initiation factor 4E (eIF4E) or its isoform eIF(iso)4E is outstanding as genetic lesions of eIF4E or eIF(iso)4E may confer immunity to a number of viruses, particularly potyviruses. Unfortunately, the underlying mechanism still remains elusive. Recently, we have found that eIF4E-mediated resistance may interlink with RNA-targeted immunity. In this proposed research, we will also molecularly understand and functionally characterize the eIF4E interactome in the context of virus infection, particularly the role of RNA-target immunity in eIF4E-mediated resistance using genetic, molecular and biochemical approaches.