去m6A修饰介导tRNAVal剪切产生tRF-RNA3008A结合Ago2蛋白抑制结肠癌增殖和侵袭转移的分子机制研究
结题报告
批准号:
81974384
项目类别:
面上项目
资助金额:
55.0 万元
负责人:
曾珊
依托单位:
学科分类:
肿瘤表观遗传
结题年份:
2023
批准年份:
2019
项目状态:
已结题
项目参与者:
曾珊
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中文摘要
表观遗传学异常是人类恶性肿瘤发生进展的重要原因,tRNA的m6A甲基化修饰在tRNA的剪接中发挥重要作用,tRF-RNA来源于tRNA精确剪切产物,tRF-RNA通过靶向竞争性结合RNA稳定蛋白,发挥“置换机制”直接或间接调控肿瘤细胞的生物学行为。本项目拟在课题组前期细胞及组织预实验和相关生物信息学分析的基础上,运用LC-MS/MS、CLIP、RIP-seq、RNA-EMSA、小动物活体成像等技术,在细胞学、动物模型、临床样本三个层次,逐层深入验证tRNAVal去除m6A修饰后剪切产生tRF-RNA3008A,它替代促癌基因ADAMTS-4 mRNA,竞争性结合RNA稳定蛋白Ago2,导致ADAMTS-4 mRNA发生降解,从而抑制结肠癌细胞增殖和侵袭转移的科学假设及分子机制。为靶向m6A修饰酶、tRF-RNA、RNA结合蛋白,改善结肠癌患者预后,提供新的线索和可靠的科学理论依据。
英文摘要
Epigenetic abnormality is an important root of the invasion and metastasis of colon cancer. The m6A methylation of tRNA plays an important role in the splicing of tRNA. tRF-RNA is generated by transfer RNA via m6A demethylation, which regulate the biological behaviors of malignant tumor cells by targeting RBP. Based on our preliminary experimental discoveries gotten from clinical tissue and human cell lines, as well as bioinformatics analysis for these preliminary results, the current project aims to prove our scientific hypothesis: Following m6A demethylation,tRNAVal forms tRF-RNA3008A through specific cleavage. tRF-RNA3008A competitively combines with a RNA stabilization protein of Ago2, which is originally bound with an oncogenic gene of ADAMTS-4 mRNA. Without a binding with Ago2, ADAMTS-4 mRNA will become unstable and easy to be degraded. As a result, tRF-RNA3008A will inhibit the proliferation and metastasis abilities of colon cancer cells through this replacement mechanism by a competitive binding to Ago2, instead of original RNA binder of ADAMTS-4 mRNA. The present study will prove our scientific hypothesis in independent experiments on cytology, animal models and clinical specimens by the application of multi-techniques including LC-MS / MS, CLIP,RIP-seq, RNA-EMSA, and in vivo imaging in small animal. The findings achieved from the present project are supposed to elucidate a novel formation mechanism of tRF-RNA and its anti-carcinogenic roles in colon cancer. It may also provide us with new clues and experimental evidences to discover new therapeutic vectors to improve the prognosis of colon cancer patients by targeting m6A modification enzymes, tRF-RNAs, RNA binding proteins from the viewpoint of epigenetics.
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专利列表
Prognostic stratification based on m(5)C regulators acts as a novel biomarker for immunotherapy in hepatocellular carcinoma.
基于 m5C 调节因子的预后分层可作为肝细胞癌免疫治疗的新型生物标志物
DOI:10.3389/fimmu.2022.951529
发表时间:2022
期刊:Frontiers in immunology
影响因子:7.3
作者:
通讯作者:
Intratumor heterogeneity: the hidden barrier to immunotherapy against MSI tumors from the perspective of IFN-γ signaling and tumor-infiltrating lymphocytes.
瘤内异质性:从IFN-γ信号和肿瘤浸润淋巴细胞角度看MSI肿瘤免疫治疗的隐藏障碍
DOI:10.1186/s13045-021-01166-3
发表时间:2021-10-07
期刊:Journal of hematology & oncology
影响因子:28.5
作者:Wu W;Liu Y;Zeng S;Han Y;Shen H
通讯作者:Shen H
M6A "Writer" Gene METTL14: A Favorable Prognostic Biomarker and Correlated With Immune Infiltrates in Rectal Cancer.
M6A —Writer — 基因 METTL14:一种有利的预后生物标志物,与直肠癌免疫浸润相关
DOI:10.3389/fonc.2021.615296
发表时间:2021
期刊:Frontiers in oncology
影响因子:4.7
作者:Cai C;Long J;Huang Q;Han Y;Peng Y;Guo C;Liu S;Chen Y;Shen E;Long K;Wang X;Yu J;Shen H;Zeng S
通讯作者:Zeng S
The role of the tumor microbe microenvironment in the tumor immune microenvironment: bystander, activator, or inhibitor?
肿瘤微生物微环境在肿瘤免疫微环境中的作用:旁观者、激活剂还是抑制剂?
DOI:10.1186/s13046-021-02128-w
发表时间:2021-10-16
期刊:Journal of experimental & clinical cancer research : CR
影响因子:--
作者:Ma J;Huang L;Hu D;Zeng S;Han Y;Shen H
通讯作者:Shen H
DOI:10.1016/j.isci.2022.105095
发表时间:2023-01-20
期刊:ISCIENCE
影响因子:5.8
作者:Huang, Qiaoqiao;Han, Ying;Shen, Edward;Feng, Ziyang;Peng, Yinghui;Gao, Le;Gao, Yan;Yu, Yongtin;Li, Wei;Liu, Ping;Guo, Cao;Zeng, Shan;Cai, Changjing;Shen, Hong
通讯作者:Shen, Hong
PRMT5通过USP7依赖性IFNAR1降解抑制I型干扰素反应及DC1s激活促进MSS型结肠癌免疫逃逸的研究
  • 批准号:
    82373275
  • 项目类别:
    面上项目
  • 资助金额:
    49万元
  • 批准年份:
    2023
  • 负责人:
    曾珊
  • 依托单位:
外泌体lncRNA-HULC通过SDF-1/CXCR4轴促进结肠癌干细胞侵袭转移的功能与机制研究
  • 批准号:
    81772627
  • 项目类别:
    面上项目
  • 资助金额:
    55.0万元
  • 批准年份:
    2017
  • 负责人:
    曾珊
  • 依托单位:
肿瘤靶向性E1A超顺磁纳米载体对宫颈癌的放疗增敏作用及其分子机制的实验研究
  • 批准号:
    81172470
  • 项目类别:
    面上项目
  • 资助金额:
    58.0万元
  • 批准年份:
    2011
  • 负责人:
    曾珊
  • 依托单位:
血小板活化因子引起血小板α-颗粒释放的机制探讨
  • 批准号:
    39570816
  • 项目类别:
    面上项目
  • 资助金额:
    8.5万元
  • 批准年份:
    1995
  • 负责人:
    曾珊
  • 依托单位:
国内基金
海外基金