Arabidopsis 2010 Collaborative Research: RUI: Quantifying mutation parameters in a fitness landscape: Spontaneous mutation in A. thaliana in its native range.
Arabidopsis 2010 Collaborative Research: RUI: Quantifying mutation parameters in a fitness landscape: Spontaneous mutation in A. thaliana in its native range.
批准号:
0845413
负责人:
Matthew Rutter
金额:
$25.84万
依托单位:
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-09-01 至 2015-09-30
中文摘要
突变是复制中的错误,导致后代具有与父母不同的基因。它们在许多生物现象中发挥着根本性作用;它们是所有遗传变异的最终来源,并表现为地球上生命的丰富多样性。突变也是人类和其他生物体遗传疾病的根源。尽管突变在生物学上具有重要意义,但人们对其基本特性知之甚少,包括其产生速率及其对生物体健康的影响。该项目的目标是估计突变率,并量化突变对个体生存和繁殖的影响。这些特征将通过使用植物拟南芥(Arabidopsis thaliana)在许多纯合亲本的后代中积累突变来估计。后代中的任何遗传差异都必须归因于新的突变。这些突变的影响将在最初收集亲本植物的田间地点进行量化。突变的速率和适应性效应将在实际发生的现场确定,提供比在受控实验室条件下更现实的估计。这项研究显著推进了对突变效应的基本理解,并对一系列生物学问题具有广泛的影响,从理解遗传性疾病的起源到突变在小种群命运中的作用。由于研究生物拟南芥是一种广泛使用的模式生物,这些新的突变资源将成为研究该物种或其近亲的研究人员社区的宝贵资源。来自代表性不足的群体的学生将被招募参加研究,研究人员计划在高中和本科阶段开发新的生态学和遗传学学生实验室。
英文摘要
Mutations are errors in replication that result in offspring having a different gene than either parent. They play a fundamental role in many biological phenomena; they are the ultimate source of all genetic variation and are manifested as the rich diversity of life on earth. Mutations are also the source of genetically based diseases of humans and other organisms. Despite the biological importance of mutations, little is known of their fundamental properties, including their rate of production and their effects on the health of the organism. The goal of this project is to estimate mutation rates and to quantify the effects of mutations on the survivorship and reproduction of individuals. These characteristics will be estimated by allowing mutations to accumulate in the offspring of a number of homozygous parents, using the plant Arabidopsis thaliana. Any genetic differences in the offspring must be due to new mutations. The effects of these mutations will be quantified at field sites where parental plants were originally collected. The rate and fitness effects of mutations will be determined in the field, where they would actually occur, providing a more realistic estimate than is possible in controlled laboratory conditions.This research significantly advances the fundamental understanding of mutation effects, and has broad implications for a range of biological questions from understanding the origin of heritable diseases to the role of mutations in the fate of small populations. Because the study organism, Arabidopsis thaliana, is a widely used model organism, these new mutation resources will become a valuable resource for the community of researchers studying this species or its close relatives. Students from under-represented groups will be recruited to participate in the research, and the investigators plan to develop new student labs in ecology and genetics at the high school and undergraduate levels.
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RUI: Collaborative: unPAK: undergraduates Phenotyping Arabidopsis Knockouts: A distributed genomic approach to examine evolutionarily important traits
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批准号:1355106
-
项目类别:Continuing Grant
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资助金额:$65.24万
-
财政年份:2014
-
负责人:Matthew Rutter
-
依托单位:
Collaborative: RUI: The natural history of mutations: sequence and fitness data from Arabidopsis thaliana mutation accumulation lines
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批准号:1258053
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项目类别:Standard Grant
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资助金额:$11.5万
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财政年份:2013
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负责人:Matthew Rutter
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依托单位:
Collaborative: RUI: Engaging undergraduates in genomic questions and environmental context: building a database of complex phenotypes for plant knockout mutants
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批准号:1052262
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项目类别:Standard Grant
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资助金额:$42.25万
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财政年份:2011
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负责人:Matthew Rutter
-
依托单位:
国内基金
海外基金
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