哺乳類のDNA複製タイミング制御におけるゲノムとエピゲノムの機能的リンク
哺乳類のDNA複製タイミング制御におけるゲノムとエピゲノムの機能的リンク
批准号:
21K06129
负责人:
SHARIF JAFAR
金额:
$2.66万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
2021
资助国家:
日本
项目状态:
已结题
起止时间:
2021-04-01 至 2024-03-31
中文摘要
真核生物基因组被组织成富含基因的异染色质结构域,而异染色质结构域缺乏基因,转录不活跃。Eu或异染色质也类似于A或B隔室,根据Hi-C(一种染色质构象捕获方法)的特征向量的PC1(主成分1)值计算。在S期,A室早复制,B室晚复制。然而,尚不清楚A/B划分和早/晚复制时间是否在机械上联系在一起。
英文摘要
The eukaryotic genome is organized into eu- or hetero-chromatin domains, the former is gene-rich and transcriptionally active, while the latter is gene-poor and transcriptionally inactive. Eu- or hetero-chromatin are also analogous to A or B compartments, calculated from the PC1 (primary component 1) value of the eigenvector of the Hi-C (a method for chromatin conformation capture) matrix. During S phase, A compartments replicate early while B compartments replicate late. It is, however, not understood if A/B compartmentalization and early/late replication timing is mechanistically linked.
期刊论文(3)
专著(0)
科研奖励(0)
会议论文
Efficient de novo assembly and modification of large DNA fragments
大 DNA 片段的高效从头组装和修饰
DOI:
10.1007/s11427-021-2029-0
发表时间:
2021-12-16
期刊:
SCIENCE CHINA-LIFE SCIENCES
影响因子:
9.1
作者:
[Jiang, Shuangying, Tang, Yuanwei, Dai, Junbiao]
通讯作者:
Dai, Junbiao
DOI:
10.1016/j.gde.2023.102035
发表时间:
2023-04-05
期刊:
CURRENT OPINION IN GENETICS & DEVELOPMENT
影响因子:
4
作者:
[Sharif,Jafar, Koseki,Haruhiko, Parrish,Nicholas F.]
通讯作者:
Parrish,Nicholas F.
3次元ゲノム形成の分子基盤解明及びその生物学的な意義の解析
-
批准号:24K09419
-
项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$2.91万
-
财政年份:2024
-
负责人:SHARIF JAFAR
-
依托单位:
Mechanistic link between DNA methylation and H3K9 trimethylation in mammalian cells mediated by two novel SRA proteins- Np95 and Np97
-
批准号:26870847
-
项目类别:Grant-in-Aid for Young Scientists (B)
-
资助金额:$2.58万
-
财政年份:2014
-
负责人:SHARIF JAFAR
-
依托单位:
海外基金