Study on the specificity of DNA base sequence required for the transposition immunity of the (gamma) (delta) sequence
Study on the specificity of DNA base sequence required for the transposition immunity of the (gamma) (delta) sequence
批准号:
61480146
负责人:
GOTO Nobuichi
金额:
$4.16万
依托单位国家:
日本
项目类别:
Grant-in-Aid for General Scientific Research (B)
财政年份:
1986
资助国家:
日本
项目状态:
已结题
起止时间:
1986 至 1987
中文摘要
含有< γ >< δ >的质粒不能通过转座获得另一个< γ >< δ >的拷贝(转座免疫)。我们先前发现,< δ >末端的38-bp序列足以介导免疫。在目前的研究中。然而,< γ >-末端38bp的免疫活性较弱(1/45)。然后合成< γ >-末端38-bp序列,并克隆到质粒pUC13的smai位点,观察侧翼碱基序列对转座免疫效率的影响。将< γ >-末端38bp与天然侧翼序列之一GTAA克隆在一起。与人工smai位点序列TCCCC相比,免疫活性提高了7倍。这似乎表明转座免疫所需的碱基序列的特异性更倾向于富含at的侧翼序列而不是富含gt的侧翼序列。在第36 ~ 38位碱基序列中,ATG替代TAT使免疫降低1/28。由于ATG序列与AAG序列(< δ >-末端序列)仅相差一个碱基,而AAG具有最强的免疫力,因此对碱基37的特异性一定非常高。
英文摘要
A plasmid containing <gamma><delta> cannot acquire another copy of <gamma> <delta>by transposition (transposition immunity).We previously found that the 38-bp sequence of the <delta> terminal is sufficient to mediate the immunity. In the present study. however, the <gamma>-terminal 38 bp was shown to have weaker (1/45) immunity activity than the other. The <gamma>-terminal 38-bp sequence was then synthesized with and without a flanking 5-bp sequence and cloned into the SmaI-site of the plasmid pUC13 in order to see the effect of the flanking base sequence on the efficiency of transposition immunity. When the<gamma>-terminal 38 bp was cloned together with one of the natural flanking sequences GTAA. in stead of the artificial SmaI-site sequence TCCCC, immunity activity increased by 7-fold. It seems to suggest that the specificity of base sequence required for transposition immunity prefers AT-rich flanking sequence to GT-rich one. As for the base sequence between 36th and 38th, the substitution of TAT with ATG reduced the immunity by 1/28. Since the sequence ATG differs only one base from the sequnce AAG (the <delta>-terminal suquence), which had the strongest immunity, the specificity fo the base 37 must be extremely high.
期刊论文(14)
专著(0)
科研奖励(0)
会议论文
登录
查看更多内容
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
GOTO, Nobuichi: "Identification of DNA sequence requred for transposition immunity of the <gamma><delta> sequence" Journal of Bacteriology. 169. 4388-4390 (1987)
GOTO,Nobuichi:“<gamma><delta>序列转座免疫所需的 DNA 序列的鉴定”细菌学杂志。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
Goto.N;A.Mochizuki.Y;Inagaki.S;Horiuchi.T;Tanaka.and R.Nakaya: Journal of Bacteriology. 169. 4388-4390 (1987)
Goto.N;A.Mochizuki.Y;Inagaki.S;Horiuchi.T;Tanaka. 和 R.Nakaya:细菌学杂志。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
後藤延一, 稲垣好雄, 堀内三吉, 中谷林太郎: 日本細菌学雑誌. 42. 246 (1986)
Nobuichi Goto、Yoshio Inagaki、Miyoshi Horiuchi、Rintaro Nakatani:日本细菌学杂志 42. 246 (1986)。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
GOTO, Nobuichi: "Effect of flanking base sequence on transposion immunity of the <gamma><delta> sequence (in Japanese)" Nihon Saikingaku Zassi. 42. 246 (1986)
GOTO,Nobuichi:“侧翼碱基序列对 <gamma><delta> 序列转座免疫的影响(日语)”Nihon Saikingaku Zassi。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
共 9 条
Proteome Analysis of Surface Protein of Cariogenic Bacteria Influenced to Formation of Biofilm
-
批准号:14571749
-
项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$1.86万
-
财政年份:2002
-
负责人:GOTO Nobuichi
-
依托单位:
Molecular Analysis of Multiple Forms of the Streptococcus mutans Dextranase
-
批准号:09671867
-
项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$2.11万
-
财政年份:1997
-
负责人:GOTO Nobuichi
-
依托单位:
海外基金