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Understanding the amyloid fibril formation of β2-microglobulin on the basis of protein conformation

Understanding the amyloid fibril formation of β2-microglobulin on the basis of protein conformation
基于蛋白质构象了解 β2-微球蛋白淀粉样原纤维的形成
批准号:
13480219
负责人:
GOTO Yuji
金额:
$9.28万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2001
资助国家:
日本
项目状态:
已结题
起止时间:
2001 至 2003

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中文摘要
翻译
β-2-微球蛋白(β-2-m)相关性淀粉样变性是长期血液透析患者的严重并发症。为了了解β2-m形成淀粉原纤维的机制,我们一直在研究重组人β2-m的构象和淀粉原纤维的形成。1.我们建立了一种新的方法,利用酰胺质子的H/D交换结合核磁共振分析来表征单残基分辨率下β2-m淀粉原纤维的构象柔性。结果表明,分子中间区域的大部分残基,包括天然结构中的环区,形成了一个刚性的β-Sheet核心,而N-端和C-端不是这个核心的一部分。交换时间曲线偏离了单一指数曲线,与纤维的超分子结构相一致。2.另一方面,对纤维生长的实时监测对于阐明纤维形成的机理是必不可少的。硫黄素T(THT)是一种已知的试剂,在与淀粉样蛋白纤维结合时会变得强烈荧光。我们发现,通过用全内反射荧光显微镜监测β2-m的荧光,可以在不需要共价荧光标记的情况下观察到淀粉样纤维。该方法用于跟踪种子依赖的β2-m原纤维伸展动力学,揭示了单向伸展。由于THT结合对淀粉样蛋白纤维是常见的,这种方法将具有普遍的适用性,正如阿尔茨海默氏症淀粉样蛋白β肽所证实的那样。
英文摘要
β2-Microglobulin (β2-m)-related amyloidosis is a serious complication in patients receiving long-term hemodialysis. To understand the mechanism of amyloid fibril formation by β2-m, we have been studying the conformation and amyloid fibril formation of recombinant human β2-m.1.We established a novel procedure using H/D exchange of amide protons combined with NMR analysis for characterizing the conformational flexibility of β2-m amyloid fibrils at single-residue resolution. The results indicated that most residues in the middle region of the molecule, including the loop regions in the native structure, form a rigid β-sheet core, while the N-and C-termini are not part of this core. The exchange time course deviated largely from a single exponential curve, consistent with the supramolecular structure of fibrils.2.On the other hand, real-time monitoring of fibril growth is essential to clarify the mechanism of fibril formation. Thioflavin T (ThT) is a reagent known to become strongly fluorescent upon binding to amyloid fibrils. We show that, by monitoring ThT fluorescence with total internal reflection fluorescence microscopy, amyloid fibrils of β2-m can be visualized without requiring covalent fluorescence labeling. This method was used to follow the kinetics of seed-dependent β2-m fibril extension, revealing the unidirectional extension. Since ThT binding is common to amyloid fibrils, this method will have general applicability as confirmed with the Alzheimer's amyloid β-peptide.
期刊论文(60)
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会议论文
Fernandez, Ariel: "Protein folding : could hydrophobic collapse be coupled with hydrogen-bond formation?"FEBS Letters. 536. 187-192 (2003)
Fernandez, Ariel:“蛋白质折叠:疏水性塌陷能否与氢键形成相结合?”FEBS Letters。
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Katou, Hidenori: "The role of disulfide bond in the amyloidogenic state of β2-microglobulin studied by heteronuclear NMR."Protein Sci.. 11. 2218-2229 (2002)
Katou, Hidenori:“通过异核 NMR 研究二硫键在 β2-微球蛋白淀粉样蛋白形成状态中的作用。”Protein Sci.. 11. 2218-2229 (2002)
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Szewczuk, Z.: "A two-process model describes the hydrogen exchange behavior of molten globule of cytochrome c with various extents of acetylation"Biochemistry. 40(32). 9623-9630 (2001)
Szewczuk, Z.:“双过程模型描述了具有不同乙酰化程度的细胞色素 c 熔球的氢交换行为”生物化学。
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Gennady Kozhukh: "Investigation of a peptide responsible for amyloid fibril formation of β2-microglobulin by Acromobacter protease I."J. Biol. Chem.. 277(2). 1310-1315 (2002)
Gennady Kozhukh:“通过 Acromobacter 蛋白酶 I 来研究负责形成 β2-微球蛋白的淀粉样原纤维的肽。J. Biol. 1310-1315 (2002)。
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共 23 条
    Role of supersaturation in the formation of amyloid fibrils
    • 批准号:
      24370067
    • 项目类别:
      Grant-in-Aid for Scientific Research (B)
    • 资助金额:
      $11.15万
    • 财政年份:
      2012
    • 负责人:
      GOTO Yuji
    • 依托单位:
    Development of the polarized target for spin-structure studies of the proton in the FNAL-E906 experiment
    Chromatin structure and nuclear territories of the intergenic region between inactivated and escape genes on human inactive X chromosome.
    • 批准号:
      22770008
    • 项目类别:
      Grant-in-Aid for Young Scientists (B)
    • 资助金额:
      $2.41万
    • 财政年份:
      2010
    • 负责人:
      GOTO Yuji
    • 依托单位:
    Role of α-β transition in the folding of proteins
    • 批准号:
      11694208
    • 项目类别:
      Grant-in-Aid for Scientific Research (B).
    • 资助金额:
      $3.14万
    • 财政年份:
      1999
    • 负责人:
      GOTO Yuji
    • 依托单位:
    海外基金