Quinoprotein Glycerol Dehydrogenase of Acetic Acid Bacteria and 5-Ketogluconate Production
Quinoprotein Glycerol Dehydrogenase of Acetic Acid Bacteria and 5-Ketogluconate Production
批准号:
16580061
负责人:
MATSUSHITA Kazunobu
金额:
$2.37万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (C)
财政年份:
2004
资助国家:
日本
项目状态:
已结题
起止时间:
2004 至 2005
中文摘要
醋酸菌胞质膜上的奎诺蛋白甘油脱氢酶(GLDH)以PQQ为假体基,不仅能氧化多醇,还能氧化d -葡萄糖酸盐,反应产物为5-酮葡萄糖酸盐(5-KGA)。在这项研究中,我们研究了独特的底物特异性,以及金属或吡咯醌醌(PQQ)的结合方式。此外,我们还试图通过基因工程的方法创造出一个高5- kga产量的菌株。金属与PQQ的结合方式:edta处理后的纯化酶对辅因子的需求表明,Mg^<2+>对与PQQ形成全酶起关键作用。Ca^<2+>进一步刺激Mg^<2+>-活化酶,使酶活性达到最高,这一现象在其他藜蛋白中从未见过。利用GLDH的荧光猝灭法对全酶形成过程中的辅助因子进行了滴定。通过滴定获得的结合动力学显示两个PQQ-和两个M…更多的g^<2+>-结合位点和一个Ca^<2+>-结合位点。此外,还表明纯化后的酶在某些洗涤剂的存在下以二聚体形式存在。因此,认为二聚化反应与GLDH.2的两个催化位点之间存在一定的关系。GLDH的催化位点:当酶在Mg^<2+>全异构化时,GLDH具有另外一个独特的性质,即在酸性和碱性ph值两个最佳ph值。而仅用Ca^<2+>制备全酶时,GLDH只有酸性pH值最优。除d -葡萄糖酸盐外,在任何GLDH底物上都可以观察到这些活性。与“体内”系统不同,当底物为d -葡萄糖酸盐时,膜组分和纯化形式的GLDH在酸性pH下表现出相对较弱的活性,而在碱性pH下则没有活性。抗d -葡萄糖酸盐活性降低的原因被证明是由于在碱性pH下与d -葡萄糖酸解离形式的金属螯合作用,以及在酸性pH下内酯的形成。高产5-KGA菌株的产生:在两株葡萄球菌中,干扰5-KGA生产的2-酮葡萄糖酸产生酶被破坏。其中一种破坏菌是唯一一种产生5kga的菌株。现在,我们还尝试进行呼吸链突变和/或内酯降解酶突变,以获得更高的5- kga生产者。x射线晶体学和催化位点的修饰:我们一直试图通过改变许多不同的洗涤剂来得到GLDH的晶体,但目前我们还不能成功地得到一个很好的晶体。而且,由于我们可以为GLDH突变体创建大肠杆菌表达系统,现在我们开始做容易出错的PCR来获得一些催化位点突变体。少
英文摘要
Quinoprotein, glycerol dehydrogenase (GLDH), on the cytoplasmic membranes of acetic acid bacteria has PQQ as the prosthetic group and oxidizes not only polyalcohols but also D-gluconate, of which the reaction product is 5-ketogluconate (5-KGA). In this study, we have examined the unique substrate specificity, and also the binding mode of metal or pyrroloquinone quinone (PQQ). Furthermore, we have also tried to create a high 5-KGA-producing strain by means of genetic engineering.1.Binding mode of metal and PQQ : The cofactor requirements of EDTA-treated purified enzyme indicated that Mg^<2+> plays a key role to form holo-enzyme with PQQ. Ca^<2+> stimulated further the Mg^<2+>-activated enzyme to exhibit the maximum enzyme activity, of which the phenomenon has never been seen in any other quinoproteins. Titration of cofactor during the holo-enzyme formation were performed by using the fluorescence quenching of GLDH. Binding kinetics obtained by the titrations exhibited two PQQ- and two M … More g^<2+>-binding sites and one Ca^<2+>-binding site. In addition, it was shown that the purified enzyme exists as a dimer form in the presence of some detergent. Thus, it is suggested that there is some relations between the dimerization and the two catalytic sites of GLDH.2.Catalytic site of GLDH : GLDH has an additional unique property, two optimum pHs, both at acidic and alkaline pHs when the enzyme was holomerized with Mg^<2+>. Whereas, GLDH exhibited only acidic pH optimum when holo-enzyme was prepared only with Ca^<2+>. These activities observed at both pHs were observed with any substrate for GLDH, except for D-gluconate. Unlike in the "in vivo" system, GLDH in the membrane fraction and also in the purified form exhibited a relatively weak activity at acidic pH and no activity at alkaline pH when substrate is D-gluconate. The reason for these decreased activity against D-gluconate was shown to be due to metal-chelating with dissociated form of D-gluconate at alkaline pH, and also due to lactone formation at acidic pH.3.Creation of high 5-KGA-producing strain : 2-Ketogluconate producing enzyme which may disturb 5-KGA production was disrupted in two strains of Gluconobacter. One of the disruptants turned out to be sole 5-KGA-producing strain. Now, we have also tried to make a respiratory chain mutation and/or lactone-degrading enzyme mutation to get a higher 5-KGA-producer.4.X-ray crystallography and modification of the catalytic site : We have been trying to get a crystal of GLDH by changing many different detergents, but at this moment we could not be succeeded to get a nice crystal. And, since we could create E.coli expression system for GLDH mutants, now we are starting to do error-prone PCR to get some catalytic site mutants. Less
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Advanced in Photosynthesis and respiration Vo.16 : Respiration in archaea and Bacteria. Diversity of Prokaryotic Respiratory Systems
光合作用和呼吸高级第 16 卷:古细菌和细菌的呼吸。
DOI:
--
发表时间:
2004
期刊:
影响因子:
--
作者:
[K.Matsushita, H.Toyama, O.Adachi, D.Moonmangmeel et al., K.Matsushita et al.]
通讯作者:
K.Matsushita et al.
Quinate oxidation in Gluconobacter oxydans IFO3244 : purification and characterization of quinoprotein quinate dehydrogenase.
氧化葡糖杆菌 IFO3244 中的奎宁酸氧化:奎宁蛋白奎宁酸脱氢酶的纯化和表征。
DOI:
--
发表时间:
2004
期刊:
FEMS Microbiol.Lett. 241(2)
影响因子:
--
作者:
[A.S.Vangnai, H.Toyama, et al.]
通讯作者:
et al.
Quinate oxidation in Gluconobacter oxydans IFO3244: purification and characterization of quinoprotein quinate dehydrogenase.
氧化葡糖杆菌 IFO3244 中的奎宁酸氧化:奎宁蛋白奎宁酸脱氢酶的纯化和表征。
DOI:
--
发表时间:
2004
期刊:
FEMS Microbiol.Lett. 241(2)
影响因子:
--
作者:
[A.S.Vangnai, H.Toyama, et al.]
通讯作者:
et al.
Advanced in Photosynthesis and Respiration Vo.16 : Respiration in Archaea and Bacteria. Diversity of Prokaryotic Respiratory Systems(Ed.by D.Zannoni)
光合作用和呼吸高级第 16 期:古细菌和细菌的呼吸。
DOI:
--
发表时间:
2004
期刊:
影响因子:
--
作者:
[K.Matsushita, H.Toyama, O.Adachi, D.Moonmangmeel et al., K.Matsushita et al., K.Matsushita et al.]
通讯作者:
K.Matsushita et al.
DOI:
10.1271/bbb.69.1120
发表时间:
2005-06-01
期刊:
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY
影响因子:
1.6
作者:
[Toyama, H, Soemphol, W, Matsushita, K]
通讯作者:
Matsushita, K
共 10 条
Basic Analysis of Oxidative Fermentation of Acetic Acid Bacteriaand Development of Novel Fermentation System
-
批准号:22380054
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$11.48万
-
财政年份:2010
-
负责人:MATSUSHITA Kazunobu
-
依托单位:
Molecular Mechanism and Structural Basis of Ubiquinone-Redox Reaction in Bacterial Respiratory Chains
-
批准号:12460045
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$9.02万
-
财政年份:2000
-
负责人:MATSUSHITA Kazunobu
-
依托单位:
Comparative and Biochemical Studies on Periplasmic Alcohol Oxidase Systems in Pseudomonads and Acetic Acid Bacteria
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批准号:10660091
-
项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$2.24万
-
财政年份:1998
-
负责人:MATSUSHITA Kazunobu
-
依托单位:
Structure and Function of Quinoprotein Dehydrogenase
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批准号:09044228
-
项目类别:Grant-in-Aid for Scientific Research (B).
-
资助金额:$4.67万
-
财政年份:1997
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负责人:MATSUSHITA Kazunobu
-
依托单位:
Mechanism for Generation and the Physiology of Inactive Form of Alcohol Dehydrogenase in Acetic Acid Bacteria
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批准号:08660114
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项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$1.47万
-
财政年份:1996
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负责人:MATSUSHITA Kazunobu
-
依托单位:
Elucidation of Ubiquinone-binding Site of Membrane-bound Quinoproteins in Oxidative Bacteria
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批准号:06660113
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项目类别:Grant-in-Aid for General Scientific Research (C)
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资助金额:$1.34万
-
财政年份:1994
-
负责人:MATSUSHITA Kazunobu
-
依托单位:
Functionnal Characters of Alcohol and Methanol Dehydrogenases in the Respiratory Chain of Acetic Acid Bacteria
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批准号:02660122
-
项目类别:Grant-in-Aid for General Scientific Research (C)
-
资助金额:$1.28万
-
财政年份:1990
-
负责人:MATSUSHITA Kazunobu
-
依托单位:
Biochemical Study on Terminal Oxidase of Bacterial Respiratory Chain
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批准号:62560086
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项目类别:Grant-in-Aid for General Scientific Research (C)
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资助金额:$1.22万
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财政年份:1987
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负责人:MATSUSHITA Kazunobu
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依托单位:
海外基金