Functional Analysis of Biosynthetic Enzymes for Natural Products
Functional Analysis of Biosynthetic Enzymes for Natural Products
批准号:
12045213
负责人:
EBIZUKA Yutaka
金额:
$11.26万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research on Priority Areas
财政年份:
2000
资助国家:
日本
项目状态:
已结题
起止时间:
2000 至 2002
中文摘要
天然产物的结构多样性是由生物合成酶来完成的,而那些位于生物合成途径最上游的酶被认为是天然产物结构多样性的主要来源,因此,我们的注意力集中在这些生物合成酶上,以便将来设计合理的生物合成机器来生产新的化学品。本研究对其中一些酶的基因克隆和功能分析进行了尝试,通过对丝状真菌中新的聚酮酶的克隆,获得了几个新的克隆,并通过在真菌和/或酵母中的异源表达分析了这些克隆的酶功能。嵌合酶和位点的构建这些克隆的定向突变体鉴定了一个用于芳香族pokyketide生产的新功能结构域。通过基于同源性的PCR方法,从各种三萜产生植物中克隆了三十多个三萜合酶cDNA。通过酵母异源表达鉴定了它们的酶功能。尝试对十三个拟南芥三萜合酶克隆中的八个进行功能分析。只有两个克隆是本研究对聚酮化合物和三萜类化合物的生物合成酶进行了广泛的功能分析,结果表明,功能基因组学方法为寻找新的天然产物提供了新的方法学途径,并利用重组技术对这些生物合成酶进行了研究,开发实用的有用化学品生产系统和构建由具有不同结构的“非天然天然产物”组成的人工化学品库是值得期待的。
英文摘要
Diverse structures of natural products are elaborated by biosynthetic enzymes, and those enzymes which work at the most upstream of biosynthetic pathways are thus regarded as the primary origin of structural diversty exhibited by natural products.Our attentions have been focused on these biosynthetic enzymes for future engineering of rationally designed biosynthetic machineries for production of new chemicals. In this study, gene cloning and functional analysis of some of these enzymes have been attempted.Continuous attempts for cloning of new polyketide synthases from filamentous fungi yielded several new clones.Enzyme functions of these clones were analyzed by heterologous expression in fungi and/or yeast. Construction of chimeric enzymes and site-directed mutants of these clones identified a new functional domain for aromatic pokyketide production.Over thirty triterpene synthase cDNAs have been cloned from various triterpene producing plants by homology based PCR methods.Their enzyme functions have been identified by heterologous expression in yeast.Functional analysis of the eight out of thirteen Arabidopsis thaliana triterpene synthase clones was attempted.Only two clones are product specific synthases for known triterpenes, while the others are multifunctional clones.In this four-year project, functional analysis of biosynthetic enzymes for polyketides and triterpenoids was extensively conducted.The results obtained in this study clearly show that functional genomics approach would provide a new methodology for the search of new natural products.Furthermore, by employing recombinant technology of these biosynthetic enzymes, development of practical production system for useful chemicals and construction of artificial chemical library comprising of "un-natural natural products" with diverse structures wouldbe expected.
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Miho Izumikawa, Michio Murata, Kazuo Tachibana, Yutaka Ebizuka, Isao Fujii.: "Cloning of Modular Type I Polyketide Synthase Genes from Salinomycin Producing Strain of Streptomyces albus."Bioorg. Med. Chem.. 11. 3401-3405 (2003)
Miho Izumikawa、Michio Murata、Kazuo Tachibana、Yutaka Ebizuka、Isao Fujii.:“从产盐霉素的白色链霉菌菌株中克隆模块化 I 型聚酮合酶基因。”Bioorg。
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通讯作者:
I.Fujii: "Enzymatic Synthesis of 1,3,6,8-Tetrahydroxynaphthalene solely from Maloxyl Coenzyme A by a Fungal Iterative Type I polykatide synthase PKSI."Biochemistry. 39. 8853-8858 (2000)
I.Fujii:“通过真菌迭代 I 型聚肽合酶 PKSI 仅从丙二酰辅酶 A 酶促合成 1,3,6,8-四羟基萘。”生物化学。
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Akira Watanabe, Yutaka Ebizuka.: "A Novel Hexaketide Naphthalene Synthesized by a Chimeric Polyketide Synthase Composed of Fungal Pentaketide and Heptaketide Synthases."Tetrahedron Lett.. 43. 369-374 (2002)
Akira Watanabe、Yutaka Ebizuka.:“由真菌五肽和七肽合成酶组成的嵌合聚酮化合物合成酶合成的新型六酮化合物萘。”Tetrahedron Lett.. 43. 369-374 (2002)
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Hiroaki Hayashi, Pengu Huang, Keiichiro Inoue, Noboru Hiraoka, Yasumasa Ikeshiro, Kazufumi Yazaki, Shige Tanaka, Tetsuo Kushiro, Masaaki Shibuya, Yutaka Ebizuka.: "Molecular Cloning and Characterization of Isomultiflorenol Synthase, a New Triterpene Synth
Hiroaki Hayashi、Pengu Huang、Keiichiro Inoue、Noboru Hiraoka、Yasumasa Ikeshiro、Kazufumi Yazaki、Shige Tanaka、Tetsuro Kushiro、Masaaki Shibuya、Yutaka Ebizuka。:“异多花烯醇合成酶(一种新的三萜合成物)的分子克隆和表征
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Yutaka Ebizuka, Yuji Katsube, Takehiko Tsutsumi, Tetsuo Kushiro, Masaaki Shibuya: "Functional Genomics Approach to the Study of Triterpene Biosynthesis."Pure Appl. Chem.. 75. 369-374 (2003)
Yutaka Ebizuka、Yuji Katsube、Takehiko Tsutsumi、Tetsuro Kushiro、Masaaki Shibuya:“三萜生物合成研究的功能基因组学方法”。
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共 31 条
Diversification of Molecular Structures by Merger of Biosynthetic Pathways
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批准号:20241049
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项目类别:Grant-in-Aid for Scientific Research (A)
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资助金额:$19.39万
-
财政年份:2008
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负责人:EBIZUKA Yutaka
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依托单位:
Functional Genomics Approach to Exploiting Molecular Diversity
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批准号:15101007
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项目类别:Grant-in-Aid for Scientific Research (S)
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资助金额:$60.9万
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财政年份:2003
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负责人:EBIZUKA Yutaka
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依托单位:
Targeted Pursuit of Bioactive Molecules That Show Inhibitory Activity Against Fungal Polyketide Synthases
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批准号:13480184
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$9.54万
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财政年份:2001
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负责人:EBIZUKA Yutaka
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依托单位:
Development of New Bio-production System for Useful Chemicals by Engineering Biosynthetic Genes
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批准号:10358015
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项目类别:Grant-in-Aid for Scientific Research (A).
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资助金额:$19.9万
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财政年份:1998
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负责人:EBIZUKA Yutaka
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依托单位:
Generation of Transgenic Medicinal Plants with Altered Saponin Productivity
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批准号:10470464
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$6.14万
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财政年份:1998
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负责人:EBIZUKA Yutaka
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依托单位:
Mechanistic Studies on Precise Substrate Recognition and Product Specificity of 2,3-Oxidosqualene Cyclases
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批准号:08458173
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$4.67万
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财政年份:1996
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负责人:EBIZUKA Yutaka
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依托单位:
The Research on the Search for Biologically Active Natural Products Utilizing Sterol Biosynthetic Enzymes as the Target
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批准号:07557372
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项目类别:Grant-in-Aid for Scientific Research (A)
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资助金额:$0.9万
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财政年份:1995
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负责人:EBIZUKA Yutaka
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依托单位:
ANALYSIS OF STRESS RESPONCES IN SOME MEDICINAL PLANT CELL CULTURES
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批准号:04453149
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项目类别:Grant-in-Aid for General Scientific Research (B)
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资助金额:$4.48万
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财政年份:1992
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负责人:EBIZUKA Yutaka
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依托单位:
PHYTOALEXIN ELICITORS AS INDUCERS OF MEDICINAL CONSTITUENTS IN SOME PLANT CELL CULTURES.
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批准号:63470125
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项目类别:Grant-in-Aid for General Scientific Research (B)
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资助金额:$0.64万
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财政年份:1988
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负责人:EBIZUKA Yutaka
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依托单位:
海外基金