CHARACTERIZING AGGRESSIVE GLIOMA COPY NUMBER SUBTYPES
CHARACTERIZING AGGRESSIVE GLIOMA COPY NUMBER SUBTYPES
批准号:
10226337
负责人:
Patrick J. Cimino
金额:
$25.62万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
已结题
起止时间:
2020-08-01 至 2022-05-07
关键词:
Abscopal effectAddressAdultAdult GliomaAffectAnimalsAntigensAutomobile DrivingBiologicalBiological MarkersBiological ModelsBiologyCDK4 geneCDKN2A geneCRISPR/Cas technologyCancer BiologyCancer CenterCell CommunicationCell CycleCell ProliferationCellsChemotherapy and/or radiationChromosome 12ClinicalClinical TrialsClinical Trials DesignDataDiagnosticDiffuseDown-RegulationFoundationsFred Hutchinson Cancer Research CenterGene Expression ProfileGene Expression ProfilingGene TransferGeneral PopulationGenesGeneticGenetic TranscriptionGlioblastomaGliomaGliomagenesisGoalsHeterogeneityHumanHuman Cell LineHuman ChromosomesImmuneImmune checkpoint inhibitorImmune systemImmunocompetentImmunologic TechniquesImmunotherapyInfiltrationIntracranial NeoplasmsIsocitrate DehydrogenaseLaboratoriesLaboratory ResearchMAP Kinase GeneMAPK Signaling Pathway PathwayMDM2 geneMajor Histocompatibility ComplexMalignant - descriptorMalignant NeoplasmsMediatingMentorsModelingMolecularMusMutationOutcomePathway interactionsPatientsPhenotypePhysiciansPrimary Brain NeoplasmsPrognosisPrognostic MarkerProgram DevelopmentPublishingRadiation therapyRecording of previous eventsResearchResearch Project GrantsResistanceResourcesRoleSamplingScientistSelection BiasSideSignal TransductionStratificationSystemTechnologyTestingTherapeuticTissue SampleTissuesTreatment outcomeTumor-infiltrating immune cellsUniversitiesWashingtonWorkbasecancer typecareer developmentcell typechemotherapychromosome 14 losschromosome 7 gainclinical practiceclinically relevantcohortdesignexperimental studyglioma cell linehuman RNA sequencingimprovedin vivoinnovationmacrophagemolecular subtypesmouse modelmutantneoplastic cellnerve stem cellneuropathologynovel strategiespatient populationpre-clinicalpreclinical studyprogenitorprognosticprogramsradiation resistanceresponsesingle-cell RNA sequencingspatiotemporalsuccesstargeted treatmenttranscriptome sequencingtreatment responsetumortumor heterogeneitytumor-immune system interactions
中文摘要
项目总结/文摘
英文摘要
PROJECT SUMMARY/ABSTRACT
This proposal describes a 5-year career development program in which the applicant’s ultimate goal is to become an
independent physician-scientist with a focused clinical practice in neuropathology and a research laboratory dedicated
to the study of diffuse gliomas. The proposed research project will capitalize on the expertise and resources available at
the University of Washington/Fred Hutchinson Cancer Research Center Cancer Consortium, which has a proven track
record of developing physician-scientists. Dr. Eric Holland, an expert in mouse models of glioma and cancer biology, will
serve as the applicant’s research mentor. Diffuse gliomas comprise the most common and malignant primary
intracranial neoplasms in adults. Furthermore, over the last several decades there has been little success in prolonging
the survival of patients with diffuse glioma, and there is yet to be effective targeted therapies. One proposed
mechanism for poor treatment response of diffuse glioma lies in the intra- and inter-tumoral molecular and cellular
heterogeneity that make up these tumors. Over the last 3 years, the applicant has worked in Dr. Holland’s laboratory to
address this molecular heterogeneity within glioma, specifically investigating the role of somatic copy number
alterations (SCNAs). Through copy number profiling across adult glioma cohorts, prognostic SCNA subtypes were defined
with clear differences in median survival and selection biases were found to exist in smaller cohorts, having implications
on clinical trial design and applicability to the general population. Along with these human biomarker projects, studies of
pre-clinical glioma mouse models have been underway to begin to elucidate genetic drivers associated with SCNAs in
glioma. One such study identified HOXA5 as being a driver of chromosome 7 gain in glioma, with HOXA5 driving an
aggressive glioma phenotype including mediating radioresistance in vivo. Combining the applicant’s previously published
work with other preliminary data, the underlying biology of SCNA subtypes will be addressed in the current proposal,
primarily through the construction of SCNA subtype glioma mouse models, which will be functionally characterized (Aim
1). Additionally, the organismal and cellular consequences of SCNA subtype-specific responses to standard therapy (Aim
2) as well as immunotherapy (Aim 3) will be characterized. Overall, the candidate’s background in human and animal
investigative and diagnostic neuropathology is well-suited for this mentored research project focused on characterizing
biological consequences of SCNAs in gliomas and may yield novel approaches for the treatment of this malignancy.
Importantly, the proposed research also establishes a model system for studying glioma-associated SCNAs and
associated driver genes in gliomagenesis, which will provide the applicant with the foundation for an independent
research program.
期刊论文(4)
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DOI:
10.4132/jptm.2022.04.13
发表时间:
2022-05
期刊:
JOURNAL OF PATHOLOGY AND TRANSLATIONAL MEDICINE
影响因子:
2.4
作者:
[Yoda, Rebecca A., Cimino, Patrick J.]
通讯作者:
Cimino, Patrick J.
DOI:
10.1038/s41587-021-00865-z
发表时间:
2021-07
期刊:
Nature biotechnology
影响因子:
46.9
作者:
[Wu SJ, Furlan SN, Mihalas AB, Kaya-Okur HS, Feroze AH, Emerson SN, Zheng Y, Carson K, Cimino PJ, Keene CD, Sarthy JF, Gottardo R, Ahmad K, Henikoff S, Patel AP]
通讯作者:
Patel AP
DOI:
10.1093/noajnl/vdab004
发表时间:
2021-01
期刊:
Neuro-oncology advances
影响因子:
--
作者:
[Nuechterlein N, Li B, Feroze A, Holland EC, Shapiro L, Haynor D, Fink J, Cimino PJ]
通讯作者:
Cimino PJ
DOI:
10.1186/s40478-021-01295-3
发表时间:
2021-12-04
期刊:
Acta neuropathologica communications
影响因子:
7.1
作者:
[Nuechterlein N, Shapiro LG, Holland EC, Cimino PJ]
通讯作者:
Cimino PJ
E-Prostanoid Receptor Subtype 2 (EP2) Regulation of Microglial Activation
-
批准号:7744758
-
项目类别:
-
资助金额:$3.31万
-
财政年份:2009
-
负责人:Patrick J. Cimino
-
依托单位:
E-Prostanoid Receptor Subtype 2 (EP2) Regulation of Microglial Activation
-
批准号:7980869
-
项目类别:
-
资助金额:$2.42万
-
财政年份:2009
-
负责人:Patrick J. Cimino
-
依托单位:
海外基金