A novel lncRNA-responsive and xenobiotic receptor-mediated regulation of drug metabolism and disposition
A novel lncRNA-responsive and xenobiotic receptor-mediated regulation of drug metabolism and disposition
批准号:
10307998
负责人:
Da Yang
金额:
$35.32万
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
未结题
起止时间:
2020-12-01 至 2025-11-30
关键词:
AffectBioinformaticsBiological AssayBiological ProcessBreast Cancer CellCancer Cell Growth RegulationCancer PatientCancer cell lineCell physiologyChIP-seqChemoresistanceChemotherapy-Oncologic ProcedureClinicalClinical ManagementCodeComputer AnalysisDataDatabasesDevelopmentDimensionsDoxorubicinDrug EffluxDrug InteractionsDrug RegulationsDrug ScreeningEnzymesEvolutionExcretory functionGenesGenetic TranscriptionGenomicsGenotypeGoalsImmunoprecipitationIn VitroLengthLocationLuciferasesMalignant NeoplasmsMediatingMedicalMetabolismModelingMolecular CloningNuclear ReceptorsNucleotidesOutcomePharmaceutical PreparationsPharmacogenomicsPrimary NeoplasmProteinsRNARNA analysisRNA-Protein InteractionRegulationReporter GenesResearchResistanceResistance developmentSamplingSpecificityTechnologyTestingTissuesTranscriptional RegulationTransfectionTreatment EfficacyUntranslated RNAUp-RegulationValidationXenobioticsabsorptionbasecancer cellcancer therapycancer typechemotherapyclinical prognosisconstitutive androstane receptorcrosslinking and immunoprecipitation sequencingdocetaxeldrug candidatedrug dispositiondrug metabolismgain of functionin vivoknock-downmachine learning modelnovelnovel strategiesoverexpressionpharmacokinetics and pharmacodynamicspregnane X receptorreceptorresponsetranscriptome sequencingtumoruptake
中文摘要
一种新的lncRNA反应和异种受体介导的药物代谢调节和
处置
摘要
药物代谢和处置是重要的异种生物反应。长非编码RNA(LncRNAs)
是长度大于200个核苷酸(NT)的非编码RNA,并且不具有蛋白质编码潜力。
尽管lncRNAs的许多生物学功能已被认识,但是否以及如何认识尚不清楚。
LncRNA可以调节药物代谢酶和转运体的表达,如果是这样的话,是否
法规与癌症的化疗耐药有关。通过对癌症非编码的综合分析
我们的初步研究发现,505个癌细胞株的基因组和高通量药物筛选数据
并从功能上表征了一组ADME(药物的吸收、分布、代谢和排泄)
化疗耐药的lncRNA,包括LINC00992,其上调与对更多
超过100种化学化合物,可能通过调节药物代谢酶和转运蛋白
与异种核受体相互作用。我们假设ADME化疗耐药的失调
LncRNAs是肿瘤化疗耐药发生的重要因素。从机械上讲,ADME
化疗耐药的lncRNA通过调节药物代谢酶和
负责化疗药物新陈代谢和处置的转运体。我们提出三个建议
具体目的是为了验证我们的假设:在目标1中,我们将进行生物信息学分析和分子克隆
IncRNAs与肿瘤化疗耐药和临床预后相关。目标2:我们将发挥作用
包括LINC00992在内的ADME耐药基因在体内和体外肿瘤中的应用研究
化疗模型。在目标3:我们将确定ADME化疗耐药的机制
包括LINC00992在内的lncRNAs调控药物代谢酶和转运蛋白的表达。
化疗仍然是癌症患者临床治疗的主要手段,但化疗耐药是一种
需要克服的重大挑战。了解新的lncRNA反应和异源核受体-
介导的化疗耐药将有助于提供新的策略,以提高治疗效果,避免
化疗耐药性的发展。
英文摘要
A novel lncRNA-responsive and xenobiotic receptor-mediated regulation of drug metabolism and
disposition
Abstract
Drug metabolism and disposition are essential xenobiotic responses. The long non-coding RNAs (lncRNAs)
are non-coding RNAs larger than 200 nucleotides (nt) in length and do not have protein-coding potentials.
Although many of the biological functions of lncRNAs have been recognized, it is unclear whether and how
lncRNAs can regulate the expression of drug-metabolizing enzymes and transporters and if so, whether the
regulations are implicated in cancer chemo-resistance. Through integrative analysis of cancer non-coding
genomic and high-through drug screening data of 505 cancer cell lines, our preliminary study have discovered
and functionally characterized a group of ADME(drug absorption, distribution, metabolism, and excretion)
chemo-resistance lncRNAs, including LINC00992, whose up-regulation is associated with resistance to more
than 100 chemotherapy compounds and may regulate drug-metabolizing enzymes and transporters through
interacting with xenobiotic nuclear receptor. We hypothesize that dysregulation of ADME chemo-resistance
lncRNAs is an important contributor for the development of cancer chemo-resistance. Mechanistically, ADME
chemo-resistance lncRNAs affect chemo-resistance through their regulation of drug-metabolizing enzymes and
transporters that are responsible for the metabolism and disposition of chemotherapy drugs. We propose three
specific aims to test our hypotheses: In Aim 1, we will perform bioinformatic analysis and molecularly clone of
lncRNAs associated with cancer chemo-resistance and clinical prognosis. In Aim 2: we will functional
characterize of ADME chemo-resistance lncRNAs, including LINC00992, using in vivo and in vitro cancer
chemotherapy models. In Aim 3: we will determine the mechanism by which ADME chemo-resistance
lncRNAs, including LINC00992, regulate the expression of drug-metabolizing enzymes and transporters.
Chemotherapy remains a mainstay in the clinical management of cancer patients, but chemo-resistance is a
major challenge to overcome. Understanding the novel lncRNA responsive and xenobiotic nuclear receptor-
mediated chemo-resistance will help provide novel strategies to enhance therapeutic efficacy and avoid the
development of chemo-resistance.
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