Data Sciences Core
Data Sciences Core
批准号:
10553990
负责人:
Bonnie LaFleur
金额:
$18.32万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2017
资助国家:
美国
项目状态:
未结题
起止时间:
2017-09-15 至 2028-02-29
关键词:
AddressAgingAlgorithmsBenchmarkingBioconductorBioinformaticsBiologicalBiometryCategoriesCell AgingCellsCodeCollaborationsComputational BiologyDataData AnalysesData ProvenanceData Science CoreData SetDevelopmentDocumentationEnsureEnvironmentExperimental DesignsFlow CytometryFormulationFosteringGoalsHumanImmuneImmune responseIn VitroInfrastructureKnowledge ManagementMapsMeasuresMetadataMethodologyMethodsModernizationMusPathway AnalysisPerformancePeripheralRejuvenationReproducibilityResearchResearch DesignResearch PersonnelResearch Project GrantsRoleSample SizeScientistSpecialistStandardizationStatistical ComputingStatistical MethodsStructureT-LymphocyteTechnologyTestingThymus GlandUpdateViralWorkcyber infrastructuredata and analysis portaldata harmonizationdata integrationdata managementdata qualitydata repositorydesigndifferential expressionexperimental analysisexperimental studyhigh throughput technologyimprovedmethod developmentmultimodalitynovelprogramsrepositorysingle cell analysissingle-cell RNA sequencingsoundstatisticstoolweb based interface
中文摘要
核心B-摘要
数据科学核心(核心B)将提供统计学、生物信息学和
计算的所有项目,核心,和调查人员在这个“胸腺和外周方面的T细胞老化和
复兴”计划项目(Program)。核心B将提供所有小鼠的生物统计学设计和分析
和整个项目的体外研究,包括可检验假设的制定、样本量的估计
数据分析的功效、性能和解释,以及结果的图形显示和解释。
此外,该核心将为scRNA-Seq分析提供生物信息学专业知识和分析。
P1 - P3和Core C中的实验。这种支持将包括数据质量检查、读取映射和
标准化,差异表达分析和途径分析,以鉴定影响细胞的亚群,
特定功能或细胞机制。核心B统计科学家广泛使用现代方法
统计计算和可重复的研究工具。这种能力促进了分析代码的共享
新的分析工具的快速部署,以及有效的调查人员访问整个项目
跨项目研究发现的数据和知识管理平台。核心B是一个重要的组成部分
这将有助于发现免疫衰老方面的新科学成果。
英文摘要
CORE B- Abstract
The Data Sciences Core (Core B) will provide professional expertise in statistics, bioinformatics, and
computing to all projects, cores, and investigators in this “Thymic and peripheral aspects of T cell aging and
rejuvenation” Program Project (Program). Core B will provide biostatistics design and analysis for all mouse
and in vitro studies across Program, including formulation of testable hypotheses, estimation of sample size
and power, performance and interpretation of data analyses, and graphical display and interpretation of results.
In addition, the core will provide bioinformatics expertise and analysis for the the scRNA-Seq profiling
experiments in P1 – P3 and Core C. This support will include data quality checks, read mapping and
normalization, differential expression analysis, and pathway analysis to identify subsets of cells impacting
specific functions or cellular mechanisms. Core B statistical scientists make extensive use of modern methods
of statistical computing and reproducible research tools. This capability fosters the sharing of analysis code
and results, the rapid deployment of novel analysis tools, and effective investigator access to program-wide
data and knowledge management platforms for cross-project research discovery. Core B is a vital component
of each Project and will facilitate the discovery of novel scientific results in immune aging.
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会议论文
Data Science (DS) Core B
-
批准号:10270189
-
项目类别:
-
资助金额:$59.92万
-
财政年份:2021
-
负责人:Bonnie LaFleur
-
依托单位:
Data Science (DS) Core B
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批准号:10491849
-
项目类别:
-
资助金额:$59.15万
-
财政年份:2021
-
负责人:Bonnie LaFleur
-
依托单位:
Data Science (DS) Core B
-
批准号:10689305
-
项目类别:
-
资助金额:$59.15万
-
财政年份:2021
-
负责人:Bonnie LaFleur
-
依托单位:
海外基金