Understanding Nuclear RNA Quality Control in Mammalian Nervous System
Understanding Nuclear RNA Quality Control in Mammalian Nervous System
批准号:
BB/M001199/1
负责人:
Eugene Makeyev
金额:
$76.67万
依托单位:
依托单位国家:
英国
项目类别:
Research Grant
财政年份:
2014
资助国家:
英国
项目状态:
已结题
起止时间:
2014 至 --
中文摘要
我们基因的表达通过几个精心安排的步骤进行,包括将初级转录产物转录和加工成成熟的信使分子,将信使从细胞核输出到细胞质,并将它们翻译成相应的蛋白质产物。这一精细的过程是精确调控细胞和组织特异性基因表达程序所必需的,而这反过来又是生物体正常发育和功能所不可或缺的。相反,基因表达过程中的缺陷与几种人类疾病有关,包括神经和神经精神疾病,如强直性肌营养不良症、脊髓性肌萎缩症、肌萎缩侧索硬化症、额颞痴呆,可能还有阿尔茨海默病。这些毁灭性的疾病与相当大的患者痛苦和死亡率以及国家卫生系统的严重负担有关。值得注意的是,细胞使用质量控制(QC)机制,通过识别和消除有缺陷的信使分子,可以将错误基因表达的有害影响降至最低。细胞QC的一个重要但鲜为人知的分支阻止含有插入内含子序列的未完全加工的基因转录本从细胞核输出到细胞质,从而阻止它们翻译成异常蛋白质。这种机制保留在细胞核中的转录本最终会被消除。我们团队和其他人之前的研究表明,除了它的错误监控作用外,这种核保留和消除(NRE)途径可能在神经系统(NS)发育的背景下发挥作用,作为一种能够对重要神经元基因进行确定性控制的调节机制。然而,人类和动物细胞,特别是NS细胞中NRE的分子机制尚不清楚。为此,我们建议使用候选和无偏见的发现方法相结合的方法来研究哺乳动物的NRE机制。此外,我们还建议在NS的背景下检查NRE装置的发育变化及其生物学后果。为了推进这些研究方向,我们将结合已有的分子、细胞和发育生物学技术,并进一步开发创新的实验方法。我们相信,拟议的工作将阐明确保我们基因表达计划准确性的分子机制,并开始揭示有助于NS发展和功能的新的基因调控机制。通过阐明这些重要方面,拟议的工作还应该提高我们对导致NS疾病的分子原因的理解,并最终为新的基于知识的治疗和诊断工具铺平道路。
英文摘要
Expression of our genes proceeds through several carefully orchestrated steps including transcription and processing of primary transcripts into mature messenger molecules, export of the messengers from the nucleus to the cytoplasm and their translation into corresponding protein products. This elaborate process is required for precise regulation of cell- and tissue-specific gene expression programmes, which, in turn, is indispensable for proper development and function of the organism. Conversely, defects in gene expression processes have been linked to several human diseases including neurological and neuropsychiatric conditions such as myotonic dystrophy, spinal muscular atrophy, amyotrophic lateral sclerosis, frontotemporal dementia, and possibly Alzheimer's disease. These devastating disorders are associated with considerable patient suffering and mortality as well as a serious burden for the national health system.Notably, cells employ quality control (QC) mechanisms that can minimise deleterious effects of erroneous gene expression by identifying and eliminating defective messenger molecules. An important but poorly understood branch of the cellular QC prevents export of incompletely processed gene transcripts containing intervening intron sequences from the nucleus to the cytoplasm thus preventing their translation into aberrant proteins. Transcripts retained by this mechanism in the nucleus are eventually eliminated. Previous studies by our group and others have suggested that, in addition to its error surveillance role, this nuclear retention and elimination (NRE) pathway may function in the context of developing nervous system (NS) as a regulatory mechanism enabling deterministic control of important neuronal genes. However, molecular mechanisms underlying NRE in human and animal cells in general and NS cells in particular are poorly understood.To this end, we propose to investigate mammalian NRE machinery using a combination of candidate and unbiased discovery approaches. We additionally propose to examine developmental changes in the NRE apparatus and their biological consequences in the NS context. To advance these lines of research, we will use a combination of established molecular, cellular and developmental biology techniques and will additionally develop innovative experimental approaches. We are convinced that the proposed work will shed light on molecular mechanisms ensuring accuracy of our gene expression programme and begin uncovering novel gene regulation mechanisms contributing to NS development and function. By elucidating these important aspects the proposed work should also improve our understanding of molecular causes leading to NS diseases and ultimately pave the way to new knowledge-based therapies and diagnostic tools.
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DOI:
10.1093/nar/gkx225
发表时间:
2017-06-20
期刊:
Nucleic acids research
影响因子:
14.9
作者:
[Collins KM, Kainov YA, Christodolou E, Ray D, Morris Q, Hughes T, Taylor IA, Makeyev EV, Ramos A]
通讯作者:
Ramos A
DOI:
10.1093/nar/gkx901
发表时间:
2017-12-01
期刊:
Nucleic acids research
影响因子:
14.9
作者:
[Hamid FM, Makeyev EV]
通讯作者:
Makeyev EV
DOI:
10.1016/j.semcdb.2015.10.018
发表时间:
2015-12
期刊:
Seminars in cell & developmental biology
影响因子:
7.3
作者:
[Mockenhaupt S, Makeyev EV]
通讯作者:
Makeyev EV
DOI:
10.1016/j.xpro.2023.102644
发表时间:
2023-12-15
期刊:
STAR PROTOCOLS
影响因子:
--
作者:
[Kainov, Yaroslav, Zhuravskaya, Anna, Makeyev, Eugene, V]
通讯作者:
Makeyev, Eugene, V
DOI:
10.1038/ncomms8576
发表时间:
2015-07-06
期刊:
Nature communications
影响因子:
16.6
作者:
[Dai W, Li W, Hoque M, Li Z, Tian B, Makeyev EV]
通讯作者:
Makeyev EV
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