HUMAN DISTAL XQ DNA--ANALYSIS WITH YACS
HUMAN DISTAL XQ DNA--ANALYSIS WITH YACS
批准号:
3333294
负责人:
DAVID SCHLESSINGER
金额:
$26.8万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
1989
资助国家:
美国
项目状态:
已结题
起止时间:
1989-04-01 至 1996-03-31
关键词:
DNA artificial chromosomes biochemical evolution cytogenetics fragile X syndromes gel electrophoresis genetic disorder diagnosis genetic library genetic mapping genetic markers genetic recombination genetic transcription glucose 6 phosphate dehydrogenase human genetic material tag human tissue molecular cloning nucleic acid hybridization nucleic acid probes nucleic acid repetitive sequence polymerase chain reaction sex chromosomes sex linked trait southern blotting telomere transfection transposon /insertion element
中文摘要
长期目标是制造酵母人工染色体
基于YAC的Xq 24-q28人类DNA图谱(50 Mb;约占基因组的1.5%)。
一开始,几乎所有的YAC/探针图都是重叠的,
该地区,和绘图现在将继续更完善的结构
功能水平。
结构分析将集中在位于末端的序列,
染色体,包括Xq 28端粒、脆性X染色体和常见染色体
Xq27.2-27.3中的脆性位点,将对其进行详细分析。 在
此外,定义的序列元素的分布将被确定,
在YAC和YAC重叠群中跨细胞遗传学条带。 了实验
设计用于测试关于总体GC分布的示意图
含量;高度重复序列(Alu,LI);选择的基因座
中度重复序列pTR 5;和一些简单重复序列
[包括聚(dGdC)。(dA-dT)和脆性X染色体上的(CCG)n基序
网站]。
函数分析将比较几种映射技术
6-磷酸葡萄糖脱氢酶附近的转录单位
(G6 PD);在Xq 26上的8 Mb重叠群的部分中;以及在搜索
一种基因,其中病变负责一个特定的X连锁
疾病
将转染含有G6 PD的YAC,以确定其本身
或与适当的选择标记相匹配,它们可以在
基因组中的同源位点。 类似的实验将测试
脆性X区域中的脆性可以纯粹定位于(CCG)n
重复序列或需要其他结构特征。
最后,一种方法将结构和功能研究扩展到一个
进化的观点。 人类G6 PD基因已被测序。
现在将尝试确定基因的重要区域,
通过与相应序列的比较,观察其演化特征,
通过PCR从其他灵长类动物扩增的部分,以及完整的
克隆小鼠基因的序列。 保留的假定面积
功能的重要性将因此推断;最后,YAC拟合
将在这些区域中修改选择性标记,
将被转染以测试预测。
英文摘要
The long-range objective is to make a yeast artificial chromosome
(YAC)-based map of Xq24-q28 human DNA (50 Mb; about 1.5% of the genome).
A start has been made with an overlapping YAC/probe map of nearly all of
the region, and mapping will now be continued to more refined structural
and functional levels.
Structural analysis will focus on sequences placed at the ends of
chromosomes, including the Xq28 telomere, and the Fragile X and common
fragile site in Xq27.2-27.3, which will be analyzed in detail. In
addition, the distribution of defined sequence elements win be determined
in YACs and YAC contigs across cytogenetic bands. The experiments are
designed to test conjectures about the distribution of overall GC
content; highly repetitive sequences (Alu, LI); selected loci for the
moderately repetitive sequence pTR5; and some simple sequence repeats
[including poly(dGdC).(dA-dT), and the (CCG)n motif at the Fragile X
site].
Functional analyses will compare several techniques for mapping
transcription units in the vicinity of glucose 6-phosphate dehydrogenase
(G6PD); in portions of an 8 Mb contig across Xq26; and in the search for
a gene in which lesions are responsible for a particular X-linked
disease.
G6PD-containing YACs will be transfected to determine if, either as such
or fitted with appropriate selective markers, they can recombine at
homologous sites in the genome. Comparable experiments will test whether
fragility in the Fragile X region can be localized purely to the (CCG)n
repeat sequence or requires other structural features.
Finally, one approach will extend structural and functional studies to an
evolutionary perspective. The human G6PD gene has been sequenced.
Attempts will now be made to identify important regions of the gene and
observe features of its evolution by comparing sequences to corresponding
portions amplified by PCR from other primates, and also to the complete
sequence of the cloned mouse gene. Conserved areas of putative
functional importance will thus be inferred; and finally, YACs fitted
with selective markers will be modified in those regions, and the YACs
will be transfected to test predictions.
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CORE-OUTREACH
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批准号:6109072
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资助金额:$0.2万
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批准号:3106306
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资助金额:$17.5万
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财政年份:1990
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依托单位:
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批准号:3106308
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项目类别:
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资助金额:$8.44万
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财政年份:1990
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负责人:DAVID SCHLESSINGER
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批准号:2208620
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资助金额:$301.84万
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资助金额:$303.35万
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财政年份:1990
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依托单位:
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批准号:2208619
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资助金额:$0.23万
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资助金额:$326.28万
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财政年份:1990
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负责人:DAVID SCHLESSINGER
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HUMAN DISTAL EQ DNA--ANALYSIS WITH YACS
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批准号:3333297
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项目类别:
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资助金额:$21.52万
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财政年份:1989
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资助金额:$29.55万
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依托单位:
海外基金