UW-FHCRC Variation Discovery Resource

SeattieSNPs是华盛顿大学(UW)和弗雷德·哈钦森癌症研究中心(FHCRC)的联合项目，专注于识别、基因分型和建模候选基因中的单核苷酸多态(SNPs)与人类炎症反应背后的途径之间的关系。炎症是一种与多种常见人类疾病有关的基本生理反应，包括哮喘、慢性阻塞性肺疾病、冠状动脉疾病和中风，这种反应的标志物已被确定为人类疾病风险的敏感预测因子，如C-反应蛋白。在这次更新中，我们建议：1)继续发展我们的高中 根据NHLBI研究人员的要求，通过检查与炎症以及对心、肺、血液和睡眠疾病表型重要的其他生物系统和途径有关的另外300个候选基因，成功地发现了变异资源；2)为NHLBI研究人员在电子功能预测和群体遗传分析中使用的SeattleSNPs、PGAs和DBSNP中的大规模变异数据集增强相关信息；3)在PGA资源内模拟和探索群体遗传学中的关键问题，并通过探索额外的人类群体中的变异和NHLBI研究人员的要求来探索假说；4)加强我们的合作努力，帮助NHLBI研究人员在大规模关联研究中应用变异资源，探索人类群体的疾病易感性和抵抗力；以及5)继续提供关于基因的教育机会 通过PGA提供的教程和在西雅图提供的动手计算密集讲习班，对人类种群进行分析和种群遗传研究。因此，我们计划开发新的资源，并与NHLBI的研究人员合作，探索人类基因变异与影响人类心、肺或血液功能的常见疾病风险变异之间的关系。

SeattieSNPs is a joint program between the University of Washington (UW) and the Fred Hutchinson Cancer Research Center (FHCRC) focused on identifying, genotyping, and modeling the associations between single nucleotide polymorphisms (SNPs) in candidate genes and pathways that underlie inflammatory responses in humans. Inflammation is a basic physiologic response linked to a wide variety of common human disorders including asthma, chronic obstructive pulmonary disease, coronary artery disease and stroke, and markers of this response have been identified that sensitive predictors of human disease risk such as C-reactive protein. In this renewal, we propose: 1) to continue the development of our high successful variation discovery resource by examining 300 additional candidate genes involved in inflammation as well as other biological systems and pathways important to heart, lung, blood, and sleep disease phenotypes as requested by NHLBI investigators; 2) to enhance the information associated with large-scale variation datasets in SeattleSNPs, the PGAs and dbSNP for NHLBI investigators using in silico Iunctional predictions and population genetic analyses; 3) to model and explore key questions in population genetic within the PGA resources and to explore hypothesis by exploring variation in additional human populations and as requested by NHLBI investigators; 4) to increase our collaborative efforts in helping NHLBI investigators apply variation resources in large-scale association studies explore disease susceptibility and resistance in human populations; and 5) to continue educational opportunities on genetic analysis and population genetic of human populations through tutorials offered by the PGAs, and through hands-on computational intensive workshops offered in Seattle. Therefore, our plan to generate new resources and work with the NHLBI investigators to explore the relationships that exist between variations in human genes, and variation in risk for common disorders influencing human heart, lung or blood function.