Determining the Influence of Environmental Factors upon Dominant Soil Bacterial Taxa and Functioning

细菌构成了土壤中生物多样性和生物量的主要部分，因此它们在维持土壤过程中发挥着重要作用，而土壤过程最终调节着陆地生态系统的功能。分子技术的使用使人们能够更好地了解存在于一系列土壤类型中的优势细菌的身份，尽管仍然缺乏对是什么在大地理范围内驱动这种多样性的理解。此外，关于细菌生物多样性的变化如何影响生态系统功能，如碳矿化，还没有明确的共识。这些知识对于增进我们对一系列土壤过程背后的控制因素的理解至关重要，此外，还可能为今后使用土壤质量的生物指标提供一个基本框架。最近的研究表明，pH是决定土壤群落中细菌类群丰富度的主要驱动因素，此外，还有一个新的假说，即土壤的营养状况决定了土壤中两类丰富的土壤类群的比例。我们的目标是在一系列不同的土壤类型中理清这种关系。具体地说，我们首先寻求评估pH在确定土壤优势细菌身份方面的作用，然后我们将讨论由地上植被决定的不同营养输入，以及其他环境变量如何影响土壤细菌生物多样性。我们将通过评估作为2007年农村调查(CS)一部分的所有土壤样本来实现这一点。这些土壤样本将作为农村调查的核心要素，在土壤化学和上覆植被方面进行彻底的特征描述。使用这些土壤将使我们能够将几个关键的土壤变量与细菌群落成员的具体变化联系起来。虽然我们希望解决控制土壤细菌群落多样性的基本问题，但我们也试图质疑土壤功能的微生物指示剂的有用性。因此，一旦建立了分类关系，我们将纯粹根据细菌组成/多样性的相似性来选择样本的子集，并测量碳矿化率以确定具有相似细菌多样性的群落是否具有类似的功能能力。

Bacteria constitute a major portion of the biodiversity and biomass in soils and consequently they play an essential role in maintaining soil processes which, ultimately, regulate the functioning of terrestrial ecosystems. The use of molecular techniques has permitted a greater understanding of the identities of dominant bacteria present in a range of soil types, though there is still a lack of understanding as to what drives this diversity on a large geographic scale. In addition, there is no clear consensus on how alterations in bacterial biodiversity impacts on ecosystem functions such as the mineralization of carbon. Such knowledge is essential to improving our understanding of the controlling factors behind a range of soil processes, and in addition may provide a fundamental framework for the future use of biological indicators of soil quality. Recently it has been shown that pH is the main driver in determining the richness of bacterial taxa in soil communities, and additionally there is an emerging hypothesis that the nutrient status of the soil dictates the ratio of two abundant groups of soil taxa. We aim to disentangle this relationship in a diverse range of soil types. Specifically we seek to firstly asses the role of pH in determining the identities of dominant soil bacteria, and then we will address how different nutrient inputs determined by aboveground vegetation, and additional environmental variables affect soil bacterial biodiversity. We will do this by assessing all soil samples taken as part of the Countryside Survey (CS) 2007. These soil samples will be thoroughly characterised with respect to soil chemistry and overlying vegetation as a core element of the Countryside Survey. Using these soils will allow us to correlate several key soil variables with specific changes in members of the bacterial community. Whilst we wish to address fundamental questions on the controls of soil bacterial community diversity, we also seek to question the usefulness of microbial indicators of soil functionality. Therefore, once taxonomic relationships have been established, we will select subsets of samples purely on the basis of similarity of bacterial composition/diversity, and measure carbon mineralization rates to determine whether communities of similar bacterial diversity confer similar functional abilities.