STRUC DETERMINATION OF METAL-SUBSTITUTED & ALLOSTERIC SITE VARIANTS OF H INFLU
STRUC DETERMINATION OF METAL-SUBSTITUTED & ALLOSTERIC SITE VARIANTS OF H INFLU
批准号:
7955561
负责人:
Roger Scott Rowlett
金额:
$1.11万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-07-01 至 2010-06-30
关键词:
AdoptedAllosteric SiteBicarbonate IonBicarbonate IonsBindingBinding SitesComputer Retrieval of Information on Scientific Projects DatabaseDataData CollectionData SetEnzymesFundingGrantHaemophilus influenzaeInstitutionIonsLigandsMetalsMolecularMutationProteinsResearchResearch PersonnelResourcesRoentgen RaysRoleSamplingScheduleSourceStructureStudentsUnited States National Institutes of HealthVariantbasecarbonate dehydrataseexperienceimprovedprotein structure
中文摘要
这个子项目是许多研究子项目中的一个
由NIH/NCRR资助的中心赠款提供的资源。子项目和
研究者(PI)可能从另一个NIH来源获得了主要资金,
因此可以在其他CRISP条目中表示。所列机构为
研究中心,而研究中心不一定是研究者所在的机构。
Co(II)-取代的β-碳酸酐酶。流感病毒是最近生产的。Co(II)酶的可见光谱对酶的变构状态敏感。这种酶的X射线结构分析对于(1)证明Co(II)酶与野生型Zn(II)酶是同构的,以及(2)确定碳酸氢根离子(既是底物又是变构效应物)是否直接与金属离子、变构位点或两者结合是重要的。该酶的两个样品已经结晶,存在和不存在碳酸氢根离子配体。晶体大小为0.2 - 0.3毫米,是我们去年4月收集的不成功数据的单斜晶体的改进形式。虽然我们还没有筛选这些晶体,但我们希望它们能像我们之前的样品一样表现出色(约为100%)。2.0 A)、
H.制备了流感病毒碳酸酐酶,以探索该酶中变构结合位点的作用。Arg64被认为是碳酸氢根离子与变构位点结合的关键残基。 该酶的X射线结构分析对于(1)确定该酶由于该突变而采用了两种变构状态中的哪一种,以及(2)碳酸氢根离子是否可以结合到部分修饰的变构结合位点是重要的。该酶的两个样品已经结晶,存在和不存在碳酸氢根离子。晶体的大小为0.2 - 0.4 mm,并且明显是四聚体(最有可能是P41212),类似于我们制备的其他变体的晶体。我们还没有筛选这些晶体,但根据过去的经验,希望它们能很好地发挥作用。
我们总共需要收集4个完整的数据集,每个蛋白质样本两个。结构将通过分子置换来解决,使用野生型酶或我们现有的变体蛋白质结构之一。实验数据的收集和简化应该是直接的。此外,有一个或多个本科生可以协助数据收集和分析的可能性,这取决于时间安排。
英文摘要
This subproject is one of many research subprojects utilizing the
resources provided by a Center grant funded by NIH/NCRR. The subproject and
investigator (PI) may have received primary funding from another NIH source,
and thus could be represented in other CRISP entries. The institution listed is
for the Center, which is not necessarily the institution for the investigator.
Co(II)-substituted beta-carbonic anhydrase from H. influenzae has recently been produced. The visible spectrum of the Co(II) enzyme is sensitive to allosteric state of the enzyme. X-ray structural analysis of this enzyme is important to (1) demonstrate that the Co(II) enzyme is isostructural with the wild type, Zn(II) enzyme, and (2) determine if bicarbonate ion (both a substrate and allosteric effector) binds directly to the metal ion, to the allosteric site, or both. Two samples of this enzyme have been crystallized, with and without bicarbonate ion ligand present. The crystals, which are 0.2-0.3 mm in size, are an improved form of monoclinic crystals we collected unsuccessful data on last April. While we have not yet screened these crystals, we would expect them to diffract as well as our prior sample (approx. 2.0 A)
Variant R64A of H. influenzae carbonic anhydrase has been prepared to explore the role of the allosteric binding site in this enzyme. Arg64 is believed to be a critical residue in bicarbonate ion binding to the allosteric site. X-ray structural analysis of this enzyme is important to (1) determine which of the two allosteric states the enzyme has adopted as a result of this mutation, and (2) whether or not bicarbonate ion can bind to the partially modified allosteric binding site. Two samples of this enzyme have been crystallized, with and without bicarbonate ion present. The crystals are 0.2-0.4 mm in size and clearly tetragonal (most likely P41212) , similar to crystals of other variants we have prepared. We have not yet screened these crystals, but expect them to diffract well based on past experience.
Altogether we need to collect 4 complete datasets, two for each protein sample described above. Structures will be solved by molecular replacement, using the wild-type enzyme or one of our existing variant protein structures. The experimental data collection and reduction should be straightforward. In addition, there is the possibility that one or more undergraduate students could assist in data collection and analysis, depending on scheduling.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
STRUC DETERMINATION OF METAL-SUBSTITUTED & ALLOSTERIC SITE VARIANTS OF H INFLU
-
批准号:7721325
-
项目类别:
-
资助金额:$1.25万
-
财政年份:2008
-
负责人:Roger Scott Rowlett
-
依托单位:
海外基金