LINKING CYTOSCAPE AND THE CORYNEBACTERIAL REFERENCE DATABASE CORYNEREGNET

这个子项目是许多研究子项目中的一个 由NIH/NCRR资助的中心赠款提供的资源。子项目和 研究者（PI）可能从另一个NIH来源获得了主要资金， 因此可以在其他CRISP条目中表示。所列机构为 研究中心，而研究中心不一定是研究者的研究机构。 Cytoscape的CoryneRegNetLoader和COMA插件有助于（i）将注释的原核基因调控网络导入Cytoscape，以及（ii）通过预测假定的不一致性，在基因表达谱的背景下分析这些网络。总体目标是将棒状杆菌参考数据库CoryneRegNet的策划知识与Cytoscape的基于图形的生物网络可视化和分析能力联合收割机相结合。

This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. The CoryneRegNetLoader and the COMA plug-ins for Cytoscape facilitate (i) the import of annotated prokaryotic gene regulatory networks into Cytoscape and (ii) the analysis of these networks in the context of gene expression profiles by predicting putative inconsistencies. The overall goal is to combine the curated knowledge of the corynebacterial reference database CoryneRegNet with the graph-based biological network visualization and analysis capabilities of Cytoscape.