Serotonin, Autism, and investigating cell types for CNS disorders.
Serotonin, Autism, and investigating cell types for CNS disorders.
批准号:
8384848
负责人:
JOSEPH D DOUGHERTY
金额:
$23.59万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-09-30 至 2013-11-30
关键词:
Affinity ChromatographyAreaAutistic DisorderBindingBiological AssayBrainCandidate Disease GeneCell LineCell physiologyCellsCentral Nervous System DiseasesChromosome MappingComplexDNA ResequencingDataDiseaseEtiologyExplosionFunctional disorderGene ExpressionGene MutationGenesGeneticGenetic PolymorphismHereditary DiseaseHumanIn VitroInstructionKnockout MiceLeadMethodologyMorphologyMusMutateMutationNervous system structureNeuronsOrganismPatientsPopulationRNARNA SplicingRNA-Binding ProteinsRibosomesSamplingSerotoninSymptomsSystemTechnologyTestingTranslatingTranslationsType I Epithelial Receptor CellVariantbehavior testcell typecellular targetingcostgenome wide association studyin vivomouse modeloverexpressionpatient populationserotonin transporterstable cell linetranscriptome sequencingtreatment strategy
中文摘要
神经系统由数百种不同的细胞类型组成,每种细胞都有独特的形态,
联系和基因表达。重要的是,稀有细胞类型中的扰动,构成了一小部分
对整个大脑的影响,会导致毁灭性的疾病困扰整个有机体。对于许多疾病来说,
这种疾病背后的电路和细胞尚不清楚。最近的技术进步推动了正在进行的
试图将基因多态与中枢神经系统疾病联系起来的全基因组研究激增。
同样,其他技术也极大地降低了对候选基因重新测序以识别的成本
可能的突变。尽管如此,对不同基因的多态如何导致共同的
疾病通常是不被理解的。我们最近开发了一种方法。翻译核糖体
亲和纯化(TRAP),分离任何特定细胞类型所使用的全套基因
在哺乳动物的大脑中。在这里,我们应用此方法来帮助弥合
疾病中的一个基因和一个症状有两种常见的方法。首先,当一种细胞类型被怀疑
在一种疾病中选择性地易受伤害,我们可以识别在疾病中选择性使用的一套基因
这种特定的细胞类型是潜在的疾病候选。第二,当有许多候选基因时
我们可以分析我们的细胞类型特定的翻译图谱来确定这些不同的基因
牵涉到共同的细胞类型或电路。
对于第一种方法,我们分离了5-羟色胺能神经元的完整翻译图谱。AS
长期以来,5-羟色胺能系统的失调一直被怀疑与自闭症有关,我们进行了测试
多重患者群体中5-羟色胺能基因与自闭症之间的关联。我们发现
与两个基因的常见变异相关联,并在其中一个基因中发现了一种有害的罕见变异
基因,RNA结合蛋白BRUN0L6。我们现在正在老鼠身上重述这种突变,并测试
让人联想到自闭症的行为,以及应用高通量测序来理解
该突变对体外和体内RNA的剪接和翻译的影响。
英文摘要
The nervous system is connposed of hundreds of distinct cell types, each with unique morphology,
connections, and gene expression. Importantly, perturbations in rare cell types, composing a small fraction
of the entire brain, can result in devastating disorders afflicting the entire organism. For many disorders, the
circuits and cells underlying the disease are unknown. Recent technical advances have driven an ongoing
explosion of genome wide studies attempting to associate genetic polymorphisms with disorders of the CNS.
Likewise, other technologies have dramatically reduced the cost of resequencing candidate genes to identify
putative mutations. Still, the understanding of how polymorphisms in various genes can lead to a common
disease is generally not understood. We have recently developed a methodology. Translating Ribosome
Affinity Purification (TRAP), to isolate the complete suite of genes being employed by any particular cell type
in the mammalian brain. Here, we apply this methodology to help bridge the gap between a polymorphism in
a gene and a symptom in a disorder with two general approaches. First, when a cell type is suspected of
being selectively vulnerable in a disorder, we can identify the suite of genes that are employed selectively in
that particular cell type as potential disease candidates. Second, when there are many candidate genes
known, we can analyze our cell-type specific translational profiles to determine if these various genes
implicate a common cell type or circuit.
For the first approach, we have isolated the complete translational profile of serotonergic neurons. As
dysregulation of the serotonergic system has long been suspected to be involved in autism, we have tested
the association between the serotonergic genes and autism in a large multiplex patient population. We found
association with common variants in two genes, and identified a deleterious rare variant in one of these
genes, the RNA binding protein BRUN0L6. We are now recapitulating this mutation in mice and testing for
behaviors reminiscent of autism, as well as applying high-throughput sequencing to understand the
consequence of this mutation on splicing and translation of RNA in vitro and in vivo.
期刊论文(1)
专著(0)
科研奖励(0)
会议论文
DOI:
10.3389/fnhum.2014.00012
发表时间:
2014
期刊:
Frontiers in human neuroscience
影响因子:
2.9
作者:
[Slimak MA, Ables JL, Frahm S, Antolin-Fontes B, Santos-Torres J, Moretti M, Gotti C, Ibañez-Tallon I]
通讯作者:
Ibañez-Tallon I
Molecular recording to predict cell fate decisions and animal behavior
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批准号:10260139
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项目类别:
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资助金额:$369.33万
-
财政年份:2021
-
负责人:JOSEPH D DOUGHERTY
-
依托单位:
PARALLEL ANALYSIS OF TRANSCRIPTION AND PROTEIN-DNAINTERACTIONS IN SINGLE CNS CELLS
-
批准号:10044139
-
项目类别:
-
资助金额:$9.32万
-
财政年份:2020
-
负责人:JOSEPH D DOUGHERTY
-
依托单位:
Washington University Intellectual and Developmental Disabilities Research Center
-
批准号:10631989
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资助金额:$126.0万
-
财政年份:2020
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负责人:JOSEPH D DOUGHERTY
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依托单位:
Washington University Intellectual and Developmental Disabilities Research Center
-
批准号:10630425
-
项目类别:
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资助金额:$126.59万
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财政年份:2020
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负责人:JOSEPH D DOUGHERTY
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依托单位:
Washington University Intellectual and Developmental Disabilities Research Center
-
批准号:10431917
-
项目类别:
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资助金额:$126.0万
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负责人:JOSEPH D DOUGHERTY
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依托单位:
Highly parallel analysis of 5' and 3' UTR variants in Autism Spectrum Disorders
-
批准号:10376785
-
项目类别:
-
资助金额:$57.98万
-
财政年份:2018
-
负责人:JOSEPH D DOUGHERTY
-
依托单位:
Highly parallel analysis of 5' and 3' UTR variants in Autism Spectrum Disorders
-
批准号:9579916
-
项目类别:
-
资助金额:$61.69万
-
财政年份:2018
-
负责人:JOSEPH D DOUGHERTY
-
依托单位:
Highly parallel analysis of 5' and 3' UTR variants in Autism Spectrum Disorders
-
批准号:9891101
-
项目类别:
-
资助金额:$57.92万
-
财政年份:2018
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负责人:JOSEPH D DOUGHERTY
-
依托单位:
LOCAL TRANSLATION IN ASTROCYTES
-
批准号:9898492
-
项目类别:
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资助金额:$33.36万
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财政年份:2017
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负责人:JOSEPH D DOUGHERTY
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依托单位:
Regulation of local translation in glia
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批准号:10737355
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项目类别:
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资助金额:$54.99万
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财政年份:2017
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负责人:JOSEPH D DOUGHERTY
-
依托单位:
LOCAL TRANSLATION IN ASTROCYTES
-
批准号:10152678
-
项目类别:
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资助金额:$33.36万
-
财政年份:2017
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负责人:JOSEPH D DOUGHERTY
-
依托单位:
REGULATION OF MAMMALIAN SOCIAL BEHAVIOR BY THE GTF2I FAMILY OF PROTEINS
-
批准号:9444470
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项目类别:
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资助金额:$50.48万
-
财政年份:2016
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负责人:JOSEPH D DOUGHERTY
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依托单位:
USING TRANSGENIC MICE TO EXAMINE THE ROLE OF CNIH3 VARIANTS IN OPIOID DEPENDENCE
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批准号:9891992
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项目类别:
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资助金额:$36.22万
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财政年份:2016
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负责人:JOSEPH D DOUGHERTY
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依托单位:
REGULATION OF MAMMALIAN SOCIAL BEHAVIOR BY THE GTF2I FAMILY OF PROTEINS
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批准号:9270614
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项目类别:
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资助金额:$52.02万
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负责人:JOSEPH D DOUGHERTY
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依托单位:
DEVELOPMENT OF A NOVEL APPROACH TO STUDY ALTERNATIVE TRANSLATION IN THE CNS
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批准号:8787911
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项目类别:
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资助金额:$19.06万
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负责人:JOSEPH D DOUGHERTY
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依托单位:
DEVELOPMENT OF A NOVEL APPROACH TO STUDY ALTERNATIVE TRANSLATION IN THE CNS
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批准号:8845536
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项目类别:
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资助金额:$18.78万
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财政年份:2014
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负责人:JOSEPH D DOUGHERTY
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依托单位:
TOOLS TO ENHANCE STUDY OF REMAK SCHWANN CELLS
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批准号:8450487
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项目类别:
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资助金额:$22.8万
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财政年份:2012
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负责人:JOSEPH D DOUGHERTY
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依托单位:
TRANSLATION PROFILING AND NANOSCALE LOCALIZATION OF SYNAPTIC TRANSCRIPTS
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批准号:8585107
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项目类别:
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资助金额:$22.8万
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财政年份:2012
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负责人:JOSEPH D DOUGHERTY
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依托单位:
TOOLS TO ENHANCE STUDY OF REMAK SCHWANN CELLS
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批准号:8551819
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项目类别:
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资助金额:$18.34万
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财政年份:2012
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负责人:JOSEPH D DOUGHERTY
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依托单位:
TRANSLATION PROFILING AND NANOSCALE LOCALIZATION OF SYNAPTIC TRANSCRIPTS
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批准号:8460405
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项目类别:
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资助金额:$19.0万
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财政年份:2012
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负责人:JOSEPH D DOUGHERTY
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