Center for Biomolecular NMR Data Processing and Analysis
Center for Biomolecular NMR Data Processing and Analysis
批准号:
8935143
负责人:
JEFFREY C HOCH
金额:
$137.84万
依托单位国家:
美国
项目类别:
财政年份:
2015
资助国家:
美国
项目状态:
已结题
起止时间:
2015-09-01 至 2020-05-31
关键词:
AddressAdoptionArchivesAutomobile DrivingBayesian AnalysisBedsBiologicalBiomolecular Nuclear Magnetic ResonanceCollaborationsCommunicationCommunitiesComplementComplexComputer AssistedComputer softwareComputersDataData AnalysesData FilesDepositionDiagnosticEducational workshopElectronic MailEnsureEnvironmentEvaluationFosteringFutureGoalsHourMaintenanceMetadataMethodsNMR SpectroscopyNucleic AcidsOnline SystemsPerformancePlayProcessProteinsRNARecruitment ActivityRelaxationRemote ConsultationReproducibilityResearchResearch InfrastructureResourcesRoleRunningSamplingServicesSolutionsSourceSpectrum AnalysisStructureSystemTechnologyTestingTrainingTraining SupportTranslationsUpdateValidationWorkcloud basedcomputerized data processingdata exchangedata managementdata modelingdata reductiondatabase structuredisease diagnosisdrug discoveryfile formatinnovationinsightmetabolic abnormality assessmentmetabolomicsnoveloperationprogramsprotein structureresearch and developmentsmall moleculesoftware developmentsolid state nuclear magnetic resonancestructural biologytechnology developmenttoolvirtualweb site
中文摘要
描述(由申请人提供):计算在核磁共振波谱(NMR)的生物分子应用中起着关键作用,例如结构生物学,代谢研究,疾病诊断和药物发现。来自各种来源的强大软件包促进了生物核磁共振的计算,但挑战包括难以为各种计算机平台传播和维护一组不同的软件,软件包之间的通信以及软件缺乏持久性。该提案的目的是建立一个国家核磁共振数据处理和分析中心,以简化广泛使用的核磁共振软件的发现、传播、支持和使用,开发数据捕获、抽象、互操作和工作流管理工具,并提供新颖的分析工具,所有这些都是为了提高生物核磁共振研究的可重复性。软件平台的存档将确保可重复研究的持久性。该中心将建立一个可公开访问的网站,用于发现、评估和访问各种核磁共振软件。除了一个单一的、统一的可下载包之外,所有的资源都将作为一个基于云的平台提供。三个技术研发组成部分包括计算平台、数据和生物核磁共振分析资源将由拟议的中心开发。通过促进先进的生物分子核磁共振软件的部署、利用、互操作和持久性,拟议的资源将促进生物分子核磁共振在生物医学领域的广泛应用,并有助于确保生物分子核磁共振研究的可重复性。广泛的合作将提供具体的挑战,作为核磁共振生物医学应用的范例,并推动技术发展。
英文摘要
DESCRIPTION (provided by the applicant): Computation plays a critical role in biomolecular applications of nuclear magnetic resonance spectroscopy (NMR), such as structural biology, metabolic studies, disease diagnosis, and drug discovery. Powerful software packages from a variety of sources facilitate computation in bio NMR, but challenges include the difficulty of disseminating and maintaining a diverse set of software for a diverse set of computer platforms, communication between software packages, and the lack of persistence of software. The aim of this proposal is to establish a national Center for NMR Data Processing and Analysis that will simplify discovery, dissemination, support, and use of a broad range of widely-used NMR software, develop tools for data capture, abstraction, interoperation and workflow management, and provide novel analysis tools, all with the goal of enhancing reproducibility of bio-NMR studies. An archive of the software platform will ensure persistence that is essential for reproducible research. The Center will establish a publically accessible website for discovery, evaluation, and access to a diverse set of NMR software. In addition to a single, unified downloadable package, all the resources will be made available as a cloud-based platform. Three technology research and development components encompass the computing platform, data, and analytic resources for bio-NMR to be developed by the proposed Center. By facilitating the deployment, utilization, interoperation, and persistence of advanced software for biomolecular NMR, the proposed resource will advance the application of biomolecular NMR for a wide range of challenging applications in biomedicine, and help ensure the reproducibility of bio-NMR studies. An extensive array of collaborations will provide specific challenges as exemplars of biomedical applications of NMR and drive the technology development.
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会议论文
Biological Magnetic Resonance Data Bank
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批准号:10714470
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项目类别:
-
资助金额:$75.18万
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财政年份:2023
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负责人:JEFFREY C HOCH
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依托单位:
Driving Biomedical Projects
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批准号:10652479
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项目类别:
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资助金额:$8.04万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:10581846
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项目类别:
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资助金额:$16.66万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Driving Biomedical Projects
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批准号:10406895
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项目类别:
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资助金额:$24.4万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Administration and Management
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批准号:10652460
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项目类别:
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资助金额:$32.15万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:10652459
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项目类别:
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资助金额:$138.41万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
NMRbox information management: CONNJUR and BMRB integration
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批准号:10652470
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项目类别:
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资助金额:$38.03万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:10399323
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项目类别:
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资助金额:$24.46万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:10406890
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项目类别:
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资助金额:$146.41万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Community Engagement
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批准号:10406896
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项目类别:
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资助金额:$24.4万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
NMRbox Platform
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批准号:10652463
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项目类别:
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资助金额:$27.47万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:10797119
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项目类别:
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资助金额:$18.16万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
NMRbox information management: CONNJUR and BMRB integration
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批准号:10406893
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项目类别:
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资助金额:$24.4万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:9723712
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项目类别:
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资助金额:$35.77万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Administration and Management
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批准号:10406891
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项目类别:
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资助金额:$24.4万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
NMRbox Platform
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批准号:10406892
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项目类别:
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资助金额:$24.4万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Community Engagement
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批准号:10652482
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项目类别:
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资助金额:$18.61万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:9276065
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项目类别:
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资助金额:$113.09万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
The BMRB as an evolving resource for biomolecular structure-function research
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批准号:10220987
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项目类别:
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资助金额:$84.78万
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财政年份:2014
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负责人:JEFFREY C HOCH
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依托单位:
The BMRB as an evolving resource for biomolecular structure-function research
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批准号:10387674
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项目类别:
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资助金额:$18.07万
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财政年份:2014
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负责人:JEFFREY C HOCH
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依托单位:
海外基金