Membrane Protein Expression, Purification
Membrane Protein Expression, Purification
批准号:
10229567
负责人:
Robert M Stroud
金额:
$14.57万
依托单位国家:
美国
项目类别:
财政年份:
2007
资助国家:
美国
项目状态:
已结题
起止时间:
2007-08-27 至 2022-08-31
关键词:
Bacterial ProteinsBiological AssayCD4 AntigensCell surfaceCellsClathrin AdaptorsComplexCryoelectron MicroscopyCrystallizationCytoplasmDetergentsEndoplasmic ReticulumGene MutationGenesGoalsGolgi ApparatusHIVHIV ReceptorsHIV-1ImageImmune responseInfectionIntegral Membrane ProteinLabelLeadLifeLipidsMachine LearningMembraneMembrane ProteinsMethodologyMethodsMicellesPathway interactionsPhasePhenocopyPoriferaProblem SetsProtein Structure DatabasesProteinsResolutionResourcesRoentgen RaysSamplingSerineStructureSystemTFAP2A geneThermodynamicsUbiquitinationViralViral Envelope ProteinsVirionVirusVirus ReceptorsWorkX ray diffraction analysisbasedesign and constructionnanodisknef Proteinnovelpreventprotein expressionreceptorthermostabilitytraffickingvpu Protein
中文摘要
膜蛋白(MPs)构成了一组关于功能形式表达的特殊问题,并且
英文摘要
Membrane proteins (MPs) constitute a special set of problems concerning expression in a functional form, and
purification to a pure, homogeneous and stable entity suitable for structural approaches using both cryo-EM
(Core 3) and X-ray methods (Core 6). Less than 1% of the entries in the protein structure database are
membrane proteins and most of these are bacterial proteins, reflecting the much greater difficulties of suitable
expression, purification and crystallization of membrane proteins, and particularly eukaryotic membrane
proteins. Among the accessory proteins in HIV is the membrane protein Vpu. Vpu interacts with several host
soluble and membrane proteins including two well-characterized targets for degradation via ubiquitination
pathways, these being the receptor for HIV, CD4, and BST-2 (tetherin). Mutation of the gene, selection of
constructs, and expression of Vpu, and formation of complexes with both soluble and membrane proteins are
therefore a high priority. Vpu also forms a pentameric viroporin structure that we prepare for structure analysis
and determination in Project 3.
The accessory protein Nef, together with the clathrin adaptor AP-2 and other factors, form an interaction
network with host 10-crossing integral membrane proteins SERINC3, or SERINC5 to target these restriction
factors for destruction. Expression of SERINC3 and 5 are a priority for the goals of Project 4, which are to
define this interaction network at atomic resolution. The core will screen a variety of species and constructs to
obtain the quantity and quality of protein needed for structure analysis. We have developed a general method
to prioritize, express, purify and crystallize integral membrane proteins. We will express, purify,
thermodynamically stabilize and produce membrane proteins (MPs) suitable for cryo-EM and/or X-ray
diffraction of complexes. Prioritized complexes will be assayed as to homogeneity, purity and stability.
Purification will be optimized for structure determination by cryo-EM imaging, which is particularly well suited to
complexes of relatively large size, and for crystallization. Crystallization will use detergent-lipid screens,
bicelles, nanodiscs, cubic and sponge phase crystallizations (Core 6).
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
Biochemistry core
-
批准号:10512619
-
项目类别:
-
资助金额:$158.11万
-
财政年份:2022
-
负责人:Robert M Stroud
-
依托单位:
Mapping the conformational cycle of transmembrane transporters
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批准号:8933627
-
项目类别:
-
资助金额:$210.99万
-
财政年份:2015
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负责人:Robert M Stroud
-
依托单位:
Mapping the conformational cycle of transmembrane transporters
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批准号:9751878
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项目类别:
-
资助金额:$192.63万
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财政年份:2015
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负责人:Robert M Stroud
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依托单位:
4th NIH Roadmap Meeting on Membrane Protein Structures and Complexes
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批准号:8458828
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项目类别:
-
资助金额:$2.98万
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财政年份:2012
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负责人:Robert M Stroud
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依托单位:
Project 3 - The Critical Role of Membrane Transport
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批准号:10456893
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项目类别:
-
资助金额:$51.85万
-
财政年份:2012
-
负责人:Robert M Stroud
-
依托单位:
Project 3 - The Critical Role of Membrane Transport
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批准号:10242863
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项目类别:
-
资助金额:$52.12万
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财政年份:2012
-
负责人:Robert M Stroud
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依托单位:
HIV PROTEINS AND PROTEIN INTERACTIONS
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批准号:8363832
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项目类别:
-
资助金额:$0.0万
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财政年份:2011
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负责人:Robert M Stroud
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依托单位:
RNA BINDING PROTEINS
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批准号:8363830
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项目类别:
-
资助金额:$0.0万
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财政年份:2011
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负责人:Robert M Stroud
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依托单位:
INTEGRAL MEMBRANE PROTEINS
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批准号:8363831
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项目类别:
-
资助金额:$0.0万
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财政年份:2011
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负责人:Robert M Stroud
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依托单位:
Center for Structure of Membrane Proteins
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批准号:8290668
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项目类别:
-
资助金额:$27.81万
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财政年份:2010
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负责人:Robert M Stroud
-
依托单位:
Center for Structure of Membrane Proteins
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批准号:8246543
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项目类别:
-
资助金额:$27.81万
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财政年份:2010
-
负责人:Robert M Stroud
-
依托单位:
Anachem Lipidic Cubic Phase Crystallization Robot
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批准号:7792043
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项目类别:
-
资助金额:$17.54万
-
财政年份:2010
-
负责人:Robert M Stroud
-
依托单位:
Center for Structure of Membrane Proteins
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批准号:8693620
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项目类别:
-
资助金额:$144.76万
-
财政年份:2010
-
负责人:Robert M Stroud
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依托单位:
Project 4
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批准号:8152503
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项目类别:
-
资助金额:$43.94万
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财政年份:2010
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负责人:Robert M Stroud
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依托单位:
Admin Core
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批准号:8152493
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项目类别:
-
资助金额:$14.92万
-
财政年份:2010
-
负责人:Robert M Stroud
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依托单位:
Center for Structure of Membrane Proteins
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批准号:8529561
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项目类别:
-
资助金额:$155.22万
-
财政年份:2010
-
负责人:Robert M Stroud
-
依托单位:
Center for Structure of Membrane Proteins
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批准号:8146019
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项目类别:
-
资助金额:$130.43万
-
财政年份:2010
-
负责人:Robert M Stroud
-
依托单位:
Center for Structure of Membrane Proteins
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批准号:8718077
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项目类别:
-
资助金额:$15.93万
-
财政年份:2010
-
负责人:Robert M Stroud
-
依托单位:
Center for Structure of Membrane Proteins
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批准号:8308507
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项目类别:
-
资助金额:$160.85万
-
财政年份:2010
-
负责人:Robert M Stroud
-
依托单位:
Center for Structure of Membrane Proteins
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批准号:7982328
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项目类别:
-
资助金额:$136.74万
-
财政年份:2010
-
负责人:Robert M Stroud
-
依托单位:
海外基金