BUILDING A HIGH PERFORMANC BIOINFORMATICS CLUSTER

这个子项目是许多研究子项目中的一个 由NIH/NCRR资助的中心赠款提供的资源。子项目和 研究者（PI）可能从另一个NIH来源获得了主要资金， 因此可以在其他CRISP条目中表示。所列机构为 研究中心，而研究中心不一定是研究者所在的机构。 我们建议在USD建立一个高性能的生物信息学集群。 该集群基于SD BRIN资助的32节点（64个CPU）高性能机器。 我们将把它与最先进的生物信息学软件环境相结合。 由此产生的集群将作为一个高性能的平台，生物信息学研究在USD和SD的状态。 它还将作为一个平台进行高性能计算。 具体来说，我们建议在生物信息学的背景下，研究处理器可视化，一种高性能计算技术的性能。 预计该项目将对生物信息学和高性能计算在USD和SD的研究产生重要影响。 我们已经做了一些初步的努力，取得了宝贵的经验。 我们的经验和现有实力将确保该项目继续进行。

This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. The subproject and investigator (PI) may have received primary funding from another NIH source, and thus could be represented in other CRISP entries. The institution listed is for the Center, which is not necessarily the institution for the investigator. We propose to build a high performance bioinformatics cluster at USD. The cluster is bsed on the 32-node (64 CPUs) high performance machine funded by SD BRIN. We will integrate it with the state-of-the-art bioinformatics software environment. The resulting cluster will serve as a high performance platform for bioinformatics research at USD and for the state of SD. It will also act as a platform to conduct high performance computing. Specifically, we propose to investigate the performance of processor visualization, a type of high performance computing technique, in bioinformatics context. The proposed project is expected to make an important impact on the bioinformatics and high performance computing research at USD and in SD. We have already made some initial efforts and gained valuable experience. Our experience and existing strength will ensure that the project continue to be carried out.