Biodosimetry with a fully integrated biochip using gene expression signatures

暴露于电离辐射会使许多基因的表达产生剂量依赖性变化，这可能为评估辐射暴露和剂量提供了一种手段。我们最近报道了一种完全独立的生物芯片的开发，该芯片由微流控混合器、阀门、泵、通道、室、加热器和DNA微阵列传感器组成，可对复杂的生物样品溶液（如血液）进行DMA分析。我们建议将该装置发展成为适合大规模筛选的独立式辐射生物剂量计。墨盒将包含自己的电源，控制电子，功能微流体组件和试剂。检测完成后，将墨盒插入读取器，在读取器中，信号在几秒钟内读出。该项目的具体目标是：

Exposure to ionizing radiation produces dose-dependent changes in the expression of many genes, potentially providing a means to assess both radiation exposure and dose. We have recently reported development of a completely self-contained biochip that consists of microfluidic mixers, valves, pumps, channels, chambers, heaters, and DNA microarray sensors to perform DMA analysis of complex biological sample solutions, such as blood. We propose to develop this device into a self-contained radiation biodosimeter suitable for large scale screening. The cartridge will contain its own power source, control electronics, functional microfluidic components and reagents. After assay completion, the cartridge is inserted into a reader where the signal is read out within seconds. The Specific Aims of this Project are to: 1. Develop a module for the collection of blood from a finger prick. 2. Fabricate and validate cyclo-olefinic co-polymer biochannel chips with integrated oligonucleotide arrays. 3. Develop and performance-test an integrated micro/nano fluidic cartridge for extraction and processing of RNA from whole blood. 4. Incorporate the radiation-related gene-expression signature identified by the Functional Genomics Core into customized microfluidic micro-arrays. 5. Integrate the blood sample collection device, the RNA extraction device and the hybridization microchannel device into a single self-contained biochip, and validate the performance of this biochip. 6. Integrate and evaluate reagent storage options for the self-contained cartridge. 7. Develop integrated control electronics, creating a portable instrument suitable for mass-production and application to high-throughput screening, and verification that this device meets product requirements. In summary, we will develop self-contained biochips capable of rapidly measuring expression levels of a hundred or more genes that will define radiation exposure, dose and injury. This approach will only require a drop of blood from a finger prick, and will be readily deployable for large-scale population screening in the event of a radiological incident.