Center for Biomolecular NMR Data Processing and Analysis
Center for Biomolecular NMR Data Processing and Analysis
批准号:
9276065
负责人:
JEFFREY C HOCH
金额:
$113.09万
依托单位国家:
美国
项目类别:
财政年份:
2015
资助国家:
美国
项目状态:
已结题
起止时间:
2015-09-01 至 2020-05-31
关键词:
AddressAdoptionArchivesAutomobile DrivingBayesian AnalysisBedsBiologicalBiomolecular Nuclear Magnetic ResonanceCollaborationsCommunicationCommunitiesComplementComplexComputer AssistedComputer softwareComputersDataData AnalysesData AnalyticsData FilesDepositionDiagnosticEducational workshopElectronic MailEnsureEnvironmentEvaluationFosteringFutureGoalsHourMaintenanceMetadataMethodsNMR SpectroscopyNetwork InfrastructureNucleic AcidsOnline SystemsPerformancePlayProteinsRNARecruitment ActivityRelaxationRemote ConsultationReproducibilityResearchResearch InfrastructureResourcesRoleRunningSamplingServicesSourceSpectrum AnalysisStructureSystemTechnologyTestingTrainingTraining SupportTranslationsUpdateValidationcloud basedcomputerized data processingdata exchangedata managementdata modelingdata reductiondatabase structuredisease diagnosisdrug discoveryfile formatinnovationinsightmetabolic abnormality assessmentmetabolomicsnoveloperationparallelizationprogramsprotein structureresearch and developmentsmall moleculesolid state nuclear magnetic resonancestructural biologytechnology developmenttoolvirtualweb site
中文摘要
描述(由申请人提供):计算在核磁共振光谱(NMR)的生物分子应用中起着关键作用,例如结构生物学、代谢研究、疾病诊断和药物发现。来自各种来源的强大软件包促进生物NMR中的计算,但挑战包括难以传播和维护用于不同计算机平台的不同软件集、软件包之间的通信以及缺乏软件的持久性。该提案的目的是建立一个国家NMR数据处理和分析中心,该中心将简化广泛使用的NMR软件的发现,传播,支持和使用,开发数据捕获,抽象,互操作和工作流程管理工具,并提供新的分析工具,所有这些都是为了提高生物NMR研究的再现性。软件平台的存档将确保持久性,这对可重复的研究至关重要。该中心将建立一个可访问的网站,用于发现,评估和访问各种NMR软件。除了一个统一的可下载软件包外,所有资源都将作为基于云的平台提供。三个技术研究和开发组成部分包括计算平台,数据和分析资源的生物核磁共振将由拟议的中心开发。通过促进生物分子NMR先进软件的部署、利用、互操作和持久性,拟议资源将推进生物分子NMR在生物医学中广泛的挑战性应用中的应用,并有助于确保生物NMR研究的再现性。一系列广泛的合作将提供具体的挑战,作为NMR生物医学应用的范例,并推动技术发展。
英文摘要
DESCRIPTION (provided by the applicant): Computation plays a critical role in biomolecular applications of nuclear magnetic resonance spectroscopy (NMR), such as structural biology, metabolic studies, disease diagnosis, and drug discovery. Powerful software packages from a variety of sources facilitate computation in bio NMR, but challenges include the difficulty of disseminating and maintaining a diverse set of software for a diverse set of computer platforms, communication between software packages, and the lack of persistence of software. The aim of this proposal is to establish a national Center for NMR Data Processing and Analysis that will simplify discovery, dissemination, support, and use of a broad range of widely-used NMR software, develop tools for data capture, abstraction, interoperation and workflow management, and provide novel analysis tools, all with the goal of enhancing reproducibility of bio-NMR studies. An archive of the software platform will ensure persistence that is essential for reproducible research. The Center will establish a publically accessible website for discovery, evaluation, and access to a diverse set of NMR software. In addition to a single, unified downloadable package, all the resources will be made available as a cloud-based platform. Three technology research and development components encompass the computing platform, data, and analytic resources for bio-NMR to be developed by the proposed Center. By facilitating the deployment, utilization, interoperation, and persistence of advanced software for biomolecular NMR, the proposed resource will advance the application of biomolecular NMR for a wide range of challenging applications in biomedicine, and help ensure the reproducibility of bio-NMR studies. An extensive array of collaborations will provide specific challenges as exemplars of biomedical applications of NMR and drive the technology development.
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会议论文
Biological Magnetic Resonance Data Bank
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批准号:10714470
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项目类别:
-
资助金额:$75.18万
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财政年份:2023
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负责人:JEFFREY C HOCH
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依托单位:
Driving Biomedical Projects
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批准号:10652479
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项目类别:
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资助金额:$8.04万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:10581846
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项目类别:
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资助金额:$16.66万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Driving Biomedical Projects
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批准号:10406895
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项目类别:
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资助金额:$24.4万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Administration and Management
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批准号:10652460
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项目类别:
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资助金额:$32.15万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:10652459
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项目类别:
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资助金额:$138.41万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
NMRbox information management: CONNJUR and BMRB integration
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批准号:10652470
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项目类别:
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资助金额:$38.03万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:10399323
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项目类别:
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资助金额:$24.46万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:10797119
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项目类别:
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资助金额:$18.16万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:10406890
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项目类别:
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资助金额:$146.41万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Community Engagement
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批准号:10406896
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项目类别:
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资助金额:$24.4万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
NMRbox Platform
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批准号:10652463
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项目类别:
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资助金额:$27.47万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
NMRbox information management: CONNJUR and BMRB integration
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批准号:10406893
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项目类别:
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资助金额:$24.4万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:9723712
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项目类别:
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资助金额:$35.77万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Center for Biomolecular NMR Data Processing and Analysis
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批准号:8935143
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项目类别:
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资助金额:$137.84万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Administration and Management
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批准号:10406891
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项目类别:
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资助金额:$24.4万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
NMRbox Platform
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批准号:10406892
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项目类别:
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资助金额:$24.4万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
Community Engagement
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批准号:10652482
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项目类别:
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资助金额:$18.61万
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财政年份:2015
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负责人:JEFFREY C HOCH
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依托单位:
The BMRB as an evolving resource for biomolecular structure-function research
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批准号:10220987
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项目类别:
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资助金额:$84.78万
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财政年份:2014
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负责人:JEFFREY C HOCH
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依托单位:
The BMRB as an evolving resource for biomolecular structure-function research
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批准号:10387674
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项目类别:
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资助金额:$18.07万
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财政年份:2014
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负责人:JEFFREY C HOCH
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依托单位:
海外基金