Multimode Observation of Virus Capsid Assembly
Multimode Observation of Virus Capsid Assembly
批准号:
10587218
负责人:
Adam Zlotnick
金额:
$49.34万
依托单位国家:
美国
项目类别:
财政年份:
2016
资助国家:
美国
项目状态:
未结题
起止时间:
2016-03-14 至 2027-07-31
关键词:
AddressAffinityAllosteric RegulationAntibodiesAntiviral AgentsBehaviorBindingBiochemistryBiological AssayBiophysicsBiotechnologyCapsidCapsid ProteinsCellsChargeChemicalsChemistryChronicChronic Hepatitis BComplexCrowdingCytoplasmDNA biosynthesisDataDetectionDevelopmentDevicesDissociationEndosomesEngineeringEnvironmentEpitopesExposure toFundingGenomeGoalsGrowthHepatitis B VirusKineticsLearningLife Cycle StagesLigand BindingLinkMass Spectrum AnalysisMeasuresMetabolicMethodsModelingModificationMolecular BiologyOxidation-ReductionPaperPenetrationPeptidesProteinsRNAReactionReagentResearchRoentgen RaysRoleSelf CorrectionSignal TransductionStructureSurfaceSystemTechniquesTechnologyTestingTextThermodynamicsTimeVariantViralViral GenomeViral PackagingVirusVirus AssemblyVirus DiseasesVirus-like particledelivery vehicledimerfallsflexibilityhuman pathogenimprovedin vivomacromoleculemanparticle exposurepractical applicationpreservationprotein purificationreceptorreceptor bindingresponsesealself assemblysingle moleculesmall moleculetoolviral RNA
中文摘要
摘要
乙肝病毒衣壳是由120个同源二聚体T=4组成的二十面体。在体内,它会自我组装,
包装病毒RNA,作为DNA合成的代谢室,在细胞内进行交易。
它的组装和拆解已成为有效抗病毒药物的靶标。在上一次筹资期间,
我们用结构、单分子和分子表征了纯化蛋白的组装和拆解。
对组装产品和反应的大量研究。我们对激活的变构转变进行了表征
组件,演示了在自关联期间可逆性对于保真度的重要性,并确定了
成核对引导组装路径的作用。
在这项提议中,我们提出了利用这些结果来设计病毒样颗粒的假设
具有可编程组装、货物包装、交付、投放等功能。在初步研究中,我们
开发了一种通过将货物连接到结合的小分子来将货物靶向衣壳的方法
衣壳具有高亲和力,基本上使用抗病毒作为靶向装置。这种方法可以应用于
任何货物。在某些情况下,希望在舱盖外部显示货物,在其他情况下,这是理想的
把它装进衣壳里。在初步数据中,我们演示了一种制造“孔状”衣壳的方法。
暴露在颗粒内部,并可以重新密封以封闭内容物。使用同样的技术,
我们可以在衣壳表面做补丁;这可以用来显示受体结合的补丁
配体或细胞穿透性多肽。包装在衣壳内的货物,除非它能
释放了。在初步数据中,我们开发了触发衣壳分解的技术,以响应
氧化还原电位,利用化学诱导的亚稳性。同样的方法也可以应用
至其他触发信号。这些研究的最终目标是将各种方法结合起来,以实现
结束:我们建议建立两个生物技术模型试剂,一个用于测量抗体水平,另一个用于
将包装好的货物送到特定的细胞。这些方法都建立在对
乙肝病毒衣壳组装的生物化学和生物物理。
乙肝病毒是人类最小的病原体之一。它在包装其基因组并将其传递给
将其发送到目标细胞。基于我们对衣壳组装和衣壳生物物理学的理解,我们将开发
专门包装货物分子并在细胞内输送这些试剂的方法。这个
这项研究产生的工具将为人类利用乙肝病毒提供一种手段。
英文摘要
Summary
The capsid of the Hepatitis B Virus (HBV) is a 120-homodimer T=4 icosahedron. In vivo, it self-assembles,
packages viral RNA, serves as a metabolic compartment for DNA synthesis, and trafficks within the cell.
Its assembly and disassembly have become targets for potent antivirals. In the previous funding period,
we characterized assembly and disassembly with purified protein using structural, single molecule, and
bulk studies of assembly products and reactions. We characterized the allosteric transitions that activated
assembly, demonstrated the importance of reversibility during self-association for fidelity, and identified
roles of nucleation for directing the assembly path.
In this proposal, we develop hypotheses to take advantage of these results to engineer virus-like particles
with programmable assembly, cargo packaging, delivery, and release. In preliminary studies, we
developed a method for targeting cargo to a capsid by linking the cargo to a small molecule that binds
capsid with high affinity, essentially using an antiviral as a targeting device. This method can be applied to
any cargo. In some cases, it is desirable to display cargo on the capsid exterior, in other cases it is desirable
to package it within the capsid. In preliminary data, we demonstrate an approach to making “holey” capsids
that expose the particle interior and can be re-sealed to enclose the contents. Using this same technology,
we can make patches on the capsid surface; this can be used for displaying patches of receptor-binding
ligands or cell-penetrating peptides. Cargo, packaged within a capsid, is not deliverable unless it can be
released. In preliminary data, we developed techniques for triggering capsid disassembly in response to
redox potential, taking advantage of chemically-induced metastability. This same approach can be applied
to other triggering signals. The ultimate goal of these studies is to combine the approaches to a practical
end: we propose to build two model biotech reagents, one to measure antibody levels and the other to
deliver packaged cargo to specific cells. These approaches are each built on an understanding of the
biochemistry and biophysics of HBV capsid assembly.
HBV is one the smallest human pathogens. It is remarkably efficient at packaging its genome and delivering
it to target cells. Based on our understanding of capsid assembly and capsid biophysics, we will develop
approaches to specifically packaging cargo molecules and delivering these reagents intracellularly. The
tools arising from this research will provide a means for man to take advantage of HBV.
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DOI:
10.7554/elife.31473
发表时间:
2018-01-29
期刊:
eLife
影响因子:
7.7
作者:
[Schlicksup CJ, Wang JC, Francis S, Venkatakrishnan B, Turner WW, VanNieuwenhze M, Zlotnick A]
通讯作者:
Zlotnick A
DOI:
10.1146/annurev-virology-110615-042238
发表时间:
2016-09-29
期刊:
Annual review of virology
影响因子:
11.3
作者:
[Venkatakrishnan B, Zlotnick A]
通讯作者:
Zlotnick A
DOI:
10.3390/v10010025
发表时间:
2018-01-04
期刊:
Viruses
影响因子:
--
作者:
[Wang JC, Mukhopadhyay S, Zlotnick A]
通讯作者:
Zlotnick A
Dynamics of Hepatitis B Virus Capsid Protein Dimer Regulate Assembly through an Allosteric Network.
丙型肝炎病毒衣壳蛋白二聚体的动力学通过变构网络调节组装。
DOI:
10.1021/acschembio.0c00481
发表时间:
2020-08-21
期刊:
ACS chemical biology
影响因子:
4
作者:
[Patterson A, Zhao Z, Waymire E, Zlotnick A, Bothner B]
通讯作者:
Bothner B
DOI:
10.1021/acschembio.8b00283
发表时间:
2018-08-17
期刊:
ACS chemical biology
影响因子:
4
作者:
[Qazi S, Schlicksup CJ, Rittichier J, VanNieuwenhze MS, Zlotnick A]
通讯作者:
Zlotnick A
共 11 条
The Structural Biology of HBV
-
批准号:10117172
-
项目类别:
-
资助金额:$37.92万
-
财政年份:2019
-
负责人:Adam Zlotnick
-
依托单位:
The Structural Biology of HBV
-
批准号:9899197
-
项目类别:
-
资助金额:$37.3万
-
财政年份:2019
-
负责人:Adam Zlotnick
-
依托单位:
The Structural Biology of HBV
-
批准号:10372082
-
项目类别:
-
资助金额:$37.84万
-
财政年份:2019
-
负责人:Adam Zlotnick
-
依托单位:
Multimode Observation of Virus Capsid Assembly
-
批准号:9116986
-
项目类别:
-
资助金额:$45.28万
-
财政年份:2016
-
负责人:Adam Zlotnick
-
依托单位:
Multimode Observation of Virus Capsid Assembly
-
批准号:9900731
-
项目类别:
-
资助金额:$38.29万
-
财政年份:2016
-
负责人:Adam Zlotnick
-
依托单位:
The Biophysics of Virus Capsid Assembly
-
批准号:8880573
-
项目类别:
-
资助金额:$34.73万
-
财政年份:2014
-
负责人:Adam Zlotnick
-
依托单位:
Assembly of a Dodecahedral Virus
-
批准号:8600240
-
项目类别:
-
资助金额:$6.55万
-
财政年份:2013
-
负责人:Adam Zlotnick
-
依托单位:
Assembly of a Dodecahedral Virus
-
批准号:8415339
-
项目类别:
-
资助金额:$7.31万
-
财政年份:2013
-
负责人:Adam Zlotnick
-
依托单位:
STRUCTURAL BASIS OF CONTROLLING VIRUS CAPSID ASSEMBLY
-
批准号:8171995
-
项目类别:
-
资助金额:$1.09万
-
财政年份:2010
-
负责人:Adam Zlotnick
-
依托单位:
2010 Molecular Biology of Hepatitis B Viruses Meeting
-
批准号:7915035
-
项目类别:
-
资助金额:$1.8万
-
财政年份:2010
-
负责人:Adam Zlotnick
-
依托单位:
The Biophysics of Virus Capsid Assembly
-
批准号:8277332
-
项目类别:
-
资助金额:$29.16万
-
财政年份:2009
-
负责人:Adam Zlotnick
-
依托单位:
The Biophysics of Virus Capsid Assembly
-
批准号:8076332
-
项目类别:
-
资助金额:$29.21万
-
财政年份:2009
-
负责人:Adam Zlotnick
-
依托单位:
Host Partners and Virus Assembly
-
批准号:7589508
-
项目类别:
-
资助金额:$21.03万
-
财政年份:2009
-
负责人:Adam Zlotnick
-
依托单位:
Host Partners and Virus Assembly
-
批准号:7756688
-
项目类别:
-
资助金额:$18.59万
-
财政年份:2009
-
负责人:Adam Zlotnick
-
依托单位:
The Biophysics of Virus Capsid Assembly
-
批准号:7729320
-
项目类别:
-
资助金额:$30.79万
-
财政年份:2009
-
负责人:Adam Zlotnick
-
依托单位:
2009 Physical Virology Gordon Research Conference
-
批准号:7613574
-
项目类别:
-
资助金额:$0.8万
-
财政年份:2009
-
负责人:Adam Zlotnick
-
依托单位:
The Biophysics of Virus Capsid Assembly
-
批准号:8463449
-
项目类别:
-
资助金额:$27.36万
-
财政年份:2009
-
负责人:Adam Zlotnick
-
依托单位:
The Biophysics of Virus Capsid Assembly
-
批准号:7862476
-
项目类别:
-
资助金额:$29.92万
-
财政年份:2009
-
负责人:Adam Zlotnick
-
依托单位:
Molecular Modulation of Virus Capsid Assembly
-
批准号:8463447
-
项目类别:
-
资助金额:$40.35万
-
财政年份:2005
-
负责人:Adam Zlotnick
-
依托单位:
Molecular Modulation of HBV Capsid Assembly
-
批准号:7153532
-
项目类别:
-
资助金额:$34.9万
-
财政年份:2005
-
负责人:Adam Zlotnick
-
依托单位:
海外基金