Somatic Mutations in Tissue and Saliva as Prognostic and Screening Biomarkers for Oral Premalignancy
Somatic Mutations in Tissue and Saliva as Prognostic and Screening Biomarkers for Oral Premalignancy
批准号:
10614548
负责人:
Nishant Agrawal
金额:
$38.6万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2020
资助国家:
美国
项目状态:
未结题
起止时间:
2020-07-01 至 2025-04-30
关键词:
Biological MarkersBiopsyCategoriesClinicalCohort StudiesCollectionControl GroupsCoupledDNA Sequence AlterationDetectionDevicesDiagnosisDiagnostic testsDiseaseDysplasiaEligibility DeterminationGenesGoalsHead and Neck Squamous Cell CarcinomaHealthHistologicHumanHyperplasiaIncidenceInflammatoryLeadLesionMalignant - descriptorMalignant NeoplasmsMethodsModalityMolecularMorbidity - disease rateMutationMutation DetectionOralOral DiagnosisOutcomePathogenesisPatientsProceduresPrognostic MarkerResearchRetrospective cohortSalivaSalivarySevere dysplasiaSomatic MutationTactileTestingTherapeuticTimeTissuesUnited StatesVisualWorkcancer diagnosiscohortcurative treatmentsdiagnostic accuracydriver mutationhigh riskhigh risk populationimprovedinnovationmalignant mouth neoplasmmortalitymouth squamous cell carcinomanext generation sequencingnoveloral dysplasiaoral lesionoral premalignancyoral tissuepopulation basedpremalignantprognosticprognosticationrisk stratificationsaliva samplescreeningtargeted sequencing
中文摘要
摘要
口腔鳞状细胞癌(OCSCC)是一种致命性疾病,通常先于癌前病变。
病变,使其成为一种理想的疾病筛查举措。然而,目前的筛查方案/测试不能
可靠地区分炎性和癌前发育不良病变。此外,组织学诊断
不典型增生是恶变的不完全预测因素,因为只有约15%的口腔癌前病变
癌症的进展。我们的长期目标是建立基于分子的诊断测试,用于预测
以及能够识别最有可能进展为口腔癌的高危患者的筛查,但
从更密切的监测和较少病态的治疗意图程序中受益匪浅。我们的中心假设是
癌前病变包含可识别的基因突变,可用于可靠的活检预测
(组织活检)和筛查(唾液)。我们将确定异型增生特异性突变的潜在原因
口腔鳞癌的发病机制。我们将验证在一项回顾性病例队列研究中发现的突变
已知临床结果的发育不良口腔组织研究其作为组织学预后的可能性
生物标志物。我们将使用五个现有纵向人群的唾液样本进行病例队列研究-
总部设在美国的队列,以确定是否可以在唾液中发现司机体细胞突变
口腔癌的诊断。这些研究在概念上是创新的,可能会导致最先进的风险
分层筛选。他们将是第一个定义口腔功能驱动突变的人
癌症前疾病。他们也将是第一个确定是否可以在唾液中检测到司机基因突变的人
在口腔癌诊断前,确定突变检测的时间进程,并测试其预测能力
识别具有体细胞突变的高危个体。他们在技术上具有创新性,因为他们评估了
一种新的非侵入性分子唾液筛查平台的诊断准确性。这项研究将有益于
通过提高我们识别可能进展为癌症的高危癌前口腔病变的能力,
从而允许在发病率和死亡率有限的情况下进行更早和可能更有效的干预。
英文摘要
ABSTRACT
Oral cavity squamous cell carcinoma (OCSCC) can be a lethal disease that is often preceded by premalignant
lesions, making it is an ideal disease for screening initiatives. However, current screening protocols/tests cannot
reliably differentiate between inflammatory and premalignant dysplastic lesions. Further, the histologic diagnosis
of dysplasia is an imperfect predictor of malignant transformation as only ~15% of premalignant oral lesions
progress to cancer. Our long-term goals are to establish molecular-based diagnostic tests for prognostication
and screening that are capable of identifying high-risk patients most likely to progress to oral cancer but would
greatly benefit from closer surveillance and less morbid curative intent procedures. Our central hypothesis is that
premalignant lesions contain identifiable genetic mutations that can be used for reliable biopsy prognostication
(tissue biopsies) and screening (saliva). We will identify dysplasia-specific mutations underlying the
pathogenesis of OCSCC. We will validate the mutations identified in a retrospective case-cohort study of
dysplastic oral tissues with known clinical outcomes to investigate their potential as tissue-based prognostic
biomarkers. We will conduct a case-cohort study using saliva samples from five existing longitudinal population-
based United States cohorts to determine whether driver somatic mutations can be identified in saliva prior to
the diagnosis of oral cancer. These studies are conceptually innovative and likely to result in state-of-the-art risk
stratification and screening. They would be the first to define the functional driver mutations of oral
premalignancy. They would also be the first to determine if mutations in driver genes can be detected in saliva
prior to oral cancer diagnosis, to define the time-course of mutation detection, and to test the predictive ability of
identifying high-risk individuals with somatic mutations. They are technically innovative, as they evaluate the
diagnostic accuracy of a novel non-invasive molecular salivary screening platform. This research will benefit
human health by improving our ability to identify high-risk premalignant oral lesions likely to progress to cancer,
thereby allowing for earlier and potentially more curative interventions with limited morbidity and mortality.
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DOI:
10.3389/fonc.2021.677051
发表时间:
2021
期刊:
Frontiers in oncology
影响因子:
4.7
作者:
[Broner EC, Trujillo JA, Korzinkin M, Subbannayya T, Agrawal N, Ozerov IV, Zhavoronkov A, Rooper L, Kotlov N, Shen L, Pearson AT, Rosenberg AJ, Savage PA, Mishra V, Chatterjee A, Sidransky D, Izumchenko E]
通讯作者:
Izumchenko E
DOI:
10.1002/cncr.33393
发表时间:
2021-05-15
期刊:
Cancer
影响因子:
6.2
作者:
[Shanmugam A, Hariharan AK, Hasina R, Nair JR, Katragadda S, Irusappan S, Ravichandran A, Veeramachaneni V, Bettadapura R, Bhati M, Ramaswamy V, Rao VUS, Bagadia RK, Manjunath A, Manjunath NML, Solomon MC, Maji S, Bahadur U, Bettegowda C, Papadopoulos N, Lingen MW, Hariharan R, Gupta V, Agrawal N, Izumchenko E]
通讯作者:
Izumchenko E
DOI:
10.1002/ohn.211
发表时间:
2023-06
期刊:
OTOLARYNGOLOGY-HEAD AND NECK SURGERY
影响因子:
3.4
作者:
[Yan, Kenneth, Auger, Samuel, Diaz, Ashley, Naman, Julia, Vemulapalli, Ramya, Hasina, Rifat, Izumchenko, Evgeny, Shogan, Benjamin, Agrawal, Nishant]
通讯作者:
Agrawal, Nishant
DOI:
10.1038/s41419-022-05133-9
发表时间:
2022-08-05
期刊:
CELL DEATH & DISEASE
影响因子:
9
作者:
[Ferrarotto, Renata, Mishra, Vasudha, Herz, Elad, Yaacov, Adar, Solomon, Oz, Rauch, Rami, Mondshine, Adi, Motin, Maria, Leibovich-Rivkin, Tal, Davis, Matti, Kaye, Joel, Weber, Christopher R., Shen, Le, Pearson, Alexander T., Rosenberg, Ari J., Chen, Xiangying, Singh, Alka, Aster, Jon C., Agrawal, Nishant, Izumchenko, Evgeny]
通讯作者:
Izumchenko, Evgeny
DOI:
10.1002/ijc.33828
发表时间:
2022-02-01
期刊:
International journal of cancer
影响因子:
6.4
作者:
[Ghantous Y, Omar M, Broner EC, Agrawal N, Pearson AT, Rosenberg AJ, Mishra V, Singh A, El-Naaj IA, Savage PA, Sidransky D, Marchionni L, Izumchenko E]
通讯作者:
Izumchenko E
Somatic Mutations in Tissue and Saliva as Prognostic and Screening Biomarkers for Oral Premalignancy
-
批准号:10189552
-
项目类别:
-
资助金额:$38.48万
-
财政年份:2020
-
负责人:Nishant Agrawal
-
依托单位:
Somatic Mutations in Tissue and Saliva as Prognostic and Screening Biomarkers for Oral Premalignancy
-
批准号:10388215
-
项目类别:
-
资助金额:$39.62万
-
财政年份:2020
-
负责人:Nishant Agrawal
-
依托单位:
Somatic Mutations in Tissue and Saliva as Prognostic and Screening Biomarkers for Oral Premalignancy
-
批准号:10052845
-
项目类别:
-
资助金额:$38.48万
-
财政年份:2020
-
负责人:Nishant Agrawal
-
依托单位:
Multi-analyte Approach for Earlier Detection of Cancers in Non Plasma Biofluids
-
批准号:10763308
-
项目类别:
-
资助金额:$98.71万
-
财政年份:2018
-
负责人:Nishant Agrawal
-
依托单位:
Genome Wide Discovery of Molecular Alterations in Salivary Gland Tumors
-
批准号:8539592
-
项目类别:
-
资助金额:$19.44万
-
财政年份:2012
-
负责人:Nishant Agrawal
-
依托单位:
Genome Wide Discovery of Molecular Alterations in Salivary Gland Tumors
-
批准号:8443710
-
项目类别:
-
资助金额:$24.3万
-
财政年份:2012
-
负责人:Nishant Agrawal
-
依托单位:
Genone-wide Discovery of Molecular Alterations in Head and Neck Cancer
-
批准号:7938027
-
项目类别:
-
资助金额:$125.26万
-
财政年份:2009
-
负责人:Nishant Agrawal
-
依托单位:
Genone-wide Discovery of Molecular Alterations in Head and Neck Cancer
-
批准号:7854106
-
项目类别:
-
资助金额:$123.06万
-
财政年份:2009
-
负责人:Nishant Agrawal
-
依托单位:
HNSCC: From Cancer Genomics to Personalized Biomarkers
-
批准号:9133128
-
项目类别:
-
资助金额:$35.29万
-
财政年份:--
-
负责人:Nishant Agrawal
-
依托单位:
HNSCC: From Cancer Genomics to Personalized Biomarkers
-
批准号:8529489
-
项目类别:
-
资助金额:$36.37万
-
财政年份:--
-
负责人:Nishant Agrawal
-
依托单位:
海外基金