WHOLE EXOME SEQUENCING FOR NCI (COZEN)
WHOLE EXOME SEQUENCING FOR NCI (COZEN)
批准号:
10949127
负责人:
Kimberly F Doheny
金额:
$63.46万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2023
资助国家:
美国
项目状态:
未结题
起止时间:
2023-09-14 至 2025-12-31
中文摘要
多发性骨髓瘤(MM)是一种致命的浆细胞癌,由于不明原因,黑人的发病率是黑人的2-3倍,亚洲人的发病率比白人低3-4倍,这是主要的癌症差异之一。(未确定意义的单克隆性伽马病(MGUS)是浆细胞的良性克隆,是MM的必要前驱,反映了与MM相同的种族差异。在一项正在进行的研究中,我们假设浆细胞生长/血管生成因子、慢性抗原性的种族差异
既往感染和细菌易位引起的刺激以及生活方式因素可以解释这种差异。此外,我们假设遗传变异也会导致MGUS和MM的差异。
因此,进一步探索MGUS/MM风险差异的遗传风险因素是必要的,并填补了一个知识空白。我们有1813个DNA样本来自
我们的多发性骨髓瘤是在黑人中进行的,并提出了完整的外显子组测序(WES),以更好地捕捉可能导致这一高危人群多发性骨髓瘤风险的遗传变异。我们将利用CIDR现有的WES作为对照组,用于3,350名黑人前列腺癌对照。在我们与4个种族和民族最多样化的癌症流行病学队列和来自唯一为黑人MM进行的GWA样本的合作下,我们处于独特的地位,能够进一步确定MM的遗传原因。
MGUS和MM的风险差距。更好地了解MM和MGUS风险差异的原因可能导致(MGUS向MM)进展的预防或早期治疗,已知这对生存有积极影响。如果更好地了解易感途径,初级预防(预防MGUS)也是可能的。可以针对特定的种族/民族群体进行预防。
英文摘要
Multiple myeloma (MM) is a fatal cancer of plasma cells that is 2-3 times more common among Blacks and 3-4 times less common among Asians compared to whites for unknown reasons, comprising one of the major cancer disparities. (Monoclonal gammopathy of undetermined significance (MGUS) is a benign clone of plasma cells that is a necessary precursor of MM, which mirrors the same racial disparity as MM. In an ongoing study we hypothesize that racial differences in plasma cell growth/angiogenic factors, chronic antigenic
stimulation due to previous infection and bacterial translocation as well as lifestyle factors can explain this disparity. In addition, we hypothesize that genetic variation will also contribute to the MGUS and MM disparity.
Thus, further exploration of genetic risk factors for the MGUS/MM risk disparity is warranted and fills a knowledge gap. We have 1,813 DNA samples from
our MM GWAS conducted in Blacks and propose whole exome sequencing (WES) to better capture genetic variation that could be contributing to MM risk in this high-risk population. We will leverage existing WES from CIDR for 3,350 Black prostate cancer controls as a comparison group. With our collaboration of the 4 most racially and ethnically diverse cancer epidemiology cohorts and samples from the only GWAS conducted for MM among Blacks, we are uniquely positioned to be able to further identify genetic causes of the
MGUS and MM risk disparity. Better understanding of the causes of the risk disparity for MM and MGUS could lead to prevention of progression (of MGUS to MM) or earlier treatment, known to have a positive effect on survival. Primary prevention (prevention of MGUS) is also possible with better understanding of susceptibility pathways. Prevention could be tailored to specific racial/ethnic groups.
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会议论文
CIDR: GENOTYPING SERVICES USING GWAS ILLUMINA H3AFRICA ARRAY FOR NINDS (OWOLABI)
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批准号:10948250
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项目类别:
-
资助金额:$50.4万
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财政年份:2023
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负责人:Kimberly F Doheny
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依托单位:
CIDR - UPGRADE WHOLE GENOME SEQUENCING ON 2,294 EXPERIMENTAL DNA SAMPLES FOR NCI, BEEBE-DIMMER
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批准号:10949121
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项目类别:
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资助金额:$149.85万
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财政年份:2023
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负责人:Kimberly F Doheny
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依托单位:
Predoctoral Training Program in Human Genetics
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批准号:10555383
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项目类别:
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资助金额:$58.36万
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财政年份:2023
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负责人:Kimberly F Doheny
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依托单位:
CIDR: SEQUENCING SERVICES USING WHOLE GENOME SEQUENCING FOR NCI (AMOS),
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批准号:10949101
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项目类别:
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资助金额:$86.18万
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财政年份:2023
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负责人:Kimberly F Doheny
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依托单位:
CIDR - GENOTYPING SERVICES USING ILLUMINA HUMAN METHYLATION EPIC ARRAY VERSION 2 (BLOOD) ON 1,495 EXPERIMENTAL DNA SAMPLES, NCI, HUANG
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批准号:10949132
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项目类别:
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资助金额:$52.33万
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财政年份:2023
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负责人:Kimberly F Doheny
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依托单位:
GENOTYPING SERVICES USING GWAS GLOBAL DIVERSITY ARRAY FOR NICHD (HUNT)
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批准号:10937102
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项目类别:
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资助金额:$7.43万
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财政年份:2023
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负责人:Kimberly F Doheny
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依托单位:
CIDR - SEQUENCING SERVICES USING WHOLE EXOME SEQUENCING 20X FOR NCI (BEEBE-DIMMER)
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批准号:10949097
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项目类别:
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资助金额:$101.5万
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财政年份:2023
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负责人:Kimberly F Doheny
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依托单位:
IGF::OT::IGF HIGH THROUGHPUT GENOTYPING AND DNA SEQUENCING FOR STUDYING THE GENETIC CONTRIBUTIONS TO HUMAN HEALTH AND DISEASE
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批准号:9581888
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项目类别:
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资助金额:$14.38万
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财政年份:2017
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负责人:Kimberly F Doheny
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依托单位:
IGF::OT::IGF WHOLE GENOME SEQUENCING FOR NINDS (FINKBEINER) FY 2016 CAN 8469774
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批准号:9374285
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项目类别:
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资助金额:$3.3万
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财政年份:2016
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负责人:Kimberly F Doheny
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依托单位:
CIDR - SEQUENCING AND GENOTYPING BRAIN DISEASE
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批准号:9348790
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项目类别:
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资助金额:$9.2万
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财政年份:2016
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负责人:Kimberly F Doheny
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依托单位:
ILLUMINA MULTI-ETHNIC GLOBAL ARRAY PLUS VANDERBILT BIOBANK BREAST CANCER SNPS FOR NCI (KUSHI)
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批准号:9358919
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项目类别:
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资助金额:$79.87万
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财政年份:2016
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负责人:Kimberly F Doheny
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依托单位:
IGF::OT::IGF MULTI-ETHNIC GLOBAL ARRAY FOR NIA (HARLOW) FY 2016 CAN 8469738
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批准号:9355375
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项目类别:
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资助金额:$26.92万
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财政年份:2016
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负责人:Kimberly F Doheny
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依托单位:
CUSTOM SEQUENCING (3-6MB)
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批准号:9358908
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项目类别:
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资助金额:$328.9万
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财政年份:2016
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负责人:Kimberly F Doheny
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依托单位:
WHOLE EXOME SEQUENCING PLUS UTRS (71 MB), 90% @ 20X FOR NCI (HAIMAN 1)
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批准号:9358920
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项目类别:
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资助金额:$399.0万
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财政年份:2016
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负责人:Kimberly F Doheny
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依托单位:
IGF::OT::IGF AFFYMETRIX AXIOM PILOT FOR NCI (REBBECK) PHASE 1: AFFYMETRIX AXIOM UK BIOBANK 821K AXIOM ARRAY PHASE 2: AFFYMETRIX AXIOM CUSTOM SNP, ITERATIVE DESIGN OF THE MADCAP CUS
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批准号:9155268
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项目类别:
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资助金额:$27.38万
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财政年份:2015
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负责人:Kimberly F Doheny
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依托单位:
Longitudinal Resources for Genetic Research in Behavioral and Health Sciences
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批准号:9161884
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项目类别:
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资助金额:$208.25万
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财政年份:2015
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负责人:Kimberly F Doheny
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依托单位:
IGF::OT::IGF ONCOARRAY + 20,000 CUSTOM BEADTYPES FOR NCI (PETERS)
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批准号:9155354
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项目类别:
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资助金额:$378.45万
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财政年份:2015
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负责人:Kimberly F Doheny
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依托单位:
IGF::OT::IGF GWAS HumanOmni2.5 Plus Exome for NIDCR (Diatchenko) FY 2014 CAN 8469539
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批准号:8947258
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项目类别:
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资助金额:$110.55万
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财政年份:2014
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负责人:Kimberly F Doheny
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依托单位:
IGF::OT::IGF Methylation 450k for NIEHS (Taylor) FY 2014 CAN 8469992
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批准号:8947229
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项目类别:
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资助金额:$19.78万
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财政年份:2014
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负责人:Kimberly F Doheny
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依托单位:
IGF::OT::IGF GWAS HumanCoreExome + Custom 100,000 Custom Beadtypes for NHGRI (Hindorff) FY 2014 CAN 8469278
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批准号:8947241
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项目类别:
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资助金额:$190.01万
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财政年份:2014
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负责人:Kimberly F Doheny
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依托单位:
国内基金
海外基金
全外显子组测序(Whole-Exome Sequencing,WES)检测NSCLC中难治性OCT4+循环肿瘤细胞的基因突变
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批准号:81773273
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项目类别:面上项目
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资助金额:50.0万元
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批准年份:2017
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负责人:李榕
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依托单位: