Dynamic and super-resolution imaging of endogenous proteins in Drosophila tissues

描述（由申请人提供）：荧光蛋白标签的使用在过去15年中彻底改变了细胞生物学研究的各个方面，使活细胞内动态结构的分析成为可能。绿色荧光蛋白（GFP）的克隆和随后具有广泛光谱特性的其他荧光蛋白的开发使这场革命成为可能。最新版本的荧光蛋白是光激活（PA），允许更高的动态和空间分辨率的蛋白质在细胞中。标记蛋白的动态行为可以通过分子的局部激活和观察活组织中蛋白质随时间的运动来检查。pa蛋白还使超分辨率荧光显微镜的新方法能够产生低于100纳米分辨率的合成图像，打破了光学显微镜的衍射极限。本提案的目的是显着扩大PA蛋白在完整组织中成像动态细胞过程和超分辨率荧光显微镜的实验应用。为了实现这一目标，我们将在果蝇基因的基因组背景下设计PA标签，以便在天然转录控制下分析其内源性水平表达的蛋白质。我们将使用这些pa标记的蛋白质来开发完整卵巢卵室的超分辨率成像，为超分辨率显微镜提供一套精美的分级挑战-在逐渐变厚的卵室中发现逐渐增大的生殖系环管，以及卵室周围上皮细胞内更小的环管。我们的具体目标是：1)通过重组新获得的果蝇基因组DNA BAC克隆，生产内源性水平表达pa标记蛋白的果蝇种群；2)利用双平面荧光光激活定位显微镜（BP FPALM）对果蝇卵室的环管进行超分辨率成像分析；3)利用双光子激活和共聚焦显微镜研究pa标记的环管蛋白在活环管内的蛋白质动力学。这个项目将通过极大地扩展新兴的超分辨率技术的应用，影响整个细胞生物学社区。在果蝇、斑马鱼、小鼠和秀丽隐杆线虫等实验系统中进行细胞生物学研究，这些实验系统具有广泛的遗传工具和强大的基因组计划，将发现本项目产生的工具特别有用。

DESCRIPTION (provided by applicant): The use of fluorescent protein tags has revolutionized all aspects of cell biology research during the last 15 years, enabling analysis of the dynamic structures within living cells. The cloning of Green Fluorescent Protein (GFP) and the subsequent development of additional fluorescent proteins with a wide range of spectral properties made this revolution possible. The newest versions of fluorescent proteins are photo-activatable (PA), allowing higher dynamic and spatial resolution of proteins in cells. The dynamic behavior of tagged proteins can be examined by local activation of molecules, and observation of protein movement over time in live tissue. PA-proteins have also enabled new methods of super-resolution fluorescence microscopy that yield composite images with sub-100 nm resolution, breaking the diffraction limit of light microscopy. The goal of this proposal is to significantly expand the experimental applications of PA proteins for imaging dynamic cellular processes and super-resolution fluorescence microscopy in intact tissues. To achieve this goal, we will engineer PA tags into Drosophila genes in their genomic context to allow analysis of proteins expressed at their endogenous levels under native transcriptional control. We will use these PA-tagged proteins to develop super-resolution imaging of intact ovarian egg chambers that provide a beautifully graded set of challenges for super-resolution microscopy - germline ring canals of gradually increasing size found within gradually thicker egg chambers, and much smaller ring canals within epithelial cells surrounding egg chambers. Our specific aims are: 1) produce Drosophila stocks expressing PA-tagged proteins at endogenous levels using recombineering in newly available BAC clones of Drosophila genomic DNA; 2) develop super-resolution imaging for analysis of ring canals using biplane fluorescence photoactivation localization microscopy (BP FPALM) of whole-mount Drosophila egg chambers; 3) characterize protein dynamics in living ring canals using 2-photon activation and confocal microscopy of PA-tagged ring canal proteins. This project will impact the entire cell biology community by dramatically expanding the applications of nascent super-resolution technology. Investigations of cell biology in experimental systems such as Drosophila, zebrafish, mouse and C. elegans that have extensive genetic tools and robust genome projects will find the tools generated by this project especially useful. PUBLIC HEALTH RELEVANCE: The ability to observe the inner workings of cells is crucial for understanding function in both normal conditions and disease processes. New methods for super-resolution microscopy have emerged in the last few years that dramatically improve analysis of cell biology. This project will significantly expand the use of super-resolution microscopy to the study of a wide range of proteins in intact animal tissues, which will enable much more detailed analysis of the cell biology in normal and diseased tissue.