Cracking the chemical shift code
Cracking the chemical shift code
批准号:
195727-2009
负责人:
Wishart, David
金额:
$2.91万
依托单位:
依托单位国家:
加拿大
项目类别:
Discovery Grants Program - Individual
财政年份:
2012
资助国家:
加拿大
项目状态:
已结题
起止时间:
2012-01-01 至 2013-12-31
中文摘要
核磁共振(NMR)光谱是表征化合物的最强大的分析技术之一。它通常用于世界各地的学术和工业实验室,以帮助化学家识别他们制造或分离的分子。具体来说,核磁共振是一种光谱技术,可以让科学家探测到当原子暴露在很强的磁场中时发射的无线电频率。正如不同的调幅或调频电台以不同的频率发射广播信号一样,不同类型的原子也会以特定的频率发射无线电波。这些特有的“广播”频率被称为化学位移。化学位移通常被核磁共振波谱学家用作特定标记来识别给定化合物中的原子类型。很长一段时间以来,人们都知道化学物质的变化也能提供关于物质类型和位置的信息。局部几何,甚至是分子中原子相对于其他原子的运动。然而,从原始的化学位移数据中破译这些信息是相当困难的,特别是对于像肽和蛋白质这样的大分子。最近,我的实验室在“解码”结构和动态信息方面取得了一些令人兴奋的进展,这些信息可以从蛋白质化学变化中测量出来。我们想扩展这项工作,看看我们是否可以应用这些知识来更快、更准确地确定蛋白质的3D结构和动力学,只使用化学位移信息。使用传统方法,通常需要非常熟练的核磁共振波谱师花费6个多月的艰苦,手动密集的工作来分配,生成和改进蛋白质结构。我们相信,我们新的基于化学变化的方法有可能将这个时间从六个月缩短到六分钟。这种新颖的方法还可以开辟表征蛋白质和蛋白质复合物的可能性,这些蛋白质和蛋白质复合物太难或太大,无法通过传统的核磁共振进行研究。这种速度和准确性的提高可能对核磁共振在生物学、化学和制药研究中的应用产生深远的影响。
英文摘要
Nuclear Magnetic Resonance (NMR) spectroscopy is one of the most powerful analytical techniques available for characterizing chemical compounds. It is routinely used in academic and industrial labs around the world to help chemists identify the molecules they have made or isolated. Specifically, NMR is a spectroscopic technique that allows scientists to detect radio frequencies that are emitted when atoms are exposed to very strong magnetic fields. Just as different AM or FM radio stations transmit their broadcast signals at different frequencies, different types of atoms will emit their radio waves at specific frequencies too. These characteristic "broadcast" frequencies are called chemical shifts. Chemical shifts are often used by NMR spectroscopists as specific markers to identify the type of atom in a given chemical compound. It has been known for a long time that chemical shifts can also provide information about the type, location. local geometry and even the motion of atoms relative to other atoms in a molecule. However, deciphering this information from raw chemical shift data is quite difficult, especially for large molecules such as peptides and proteins. Recently, my laboratory has made some exciting progress in "decoding" the structural and dynamic information that can be measured from protein chemical shifts. We want to extend this work and to see if we can apply this knowledge to more rapidly and accurately determine the 3D structure and dynamics of proteins using only chemical shift information. With conventional methods, it typically takes very skilled NMR spectroscopists more than six months of painstaking, manually intensive work to assign, generate and refine a protein structure. We believe that our new, chemical shift-based approach could potentially shorten this time from six months to as little as six minutes. This novel approach could also open up the possibility of characterizing proteins and protein complexes that are too difficult or too large to study by conventional NMR. Such an improvement in speed and accuracy could have profound implications in the application of NMR to biology, chemistry and pharmaceutical research.
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