Arabidopsis Hormone Database: a comprehensive genetic and phenotypic information database for plant hormone research in Arabidopsis.
Arabidopsis Hormone Database: a comprehensive genetic and phenotypic information database for plant hormone research in Arabidopsis.
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拟南芥激素数据库：拟南芥植物激素研究的综合遗传和表型信息数据库。
DOI：
10.1093/nar/gkn873
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发表时间：
2009-01
影响因子：
14.9
通讯作者：
Guo H
中科院分区：
文献类型：
--
作者：
Peng ZY;Zhou X;Li L;Yu X;Li H;Jiang Z;Cao G;Bai M;Wang X;Jiang C;Lu H;Hou X;Qu L;Wang Z;Zuo J;Fu X;Su Z;Li S;Guo H
植物激素是影响植物生长和发育的几乎每个方面的小有机分子。遗传和分子研究已经揭示了大量的基因参与对许多植物激素的反应，包括生长素、赤霉素、细胞分裂素、脱落酸、乙烯、茉莉酸、水杨酸和油菜素类固醇。在这里，我们开发了一个拟南芥激素数据库，其目的是提供一个系统和全面的观点，基因参与植物激素调节，以及植物激素控制的形态表型。基于突变体研究，转基因分析和基因本体论（GO）注释的数据，我们已经确定了拟南芥基因组中共有1026个基因参与植物激素功能。与此同时，表型本体的发展，以精确地描述了无数的表达调控的形态学过程与标准化的词汇。一个网络界面（ahd.cbi.pku.edu.cn）将允许用户快速访问有关这些基因的信息，包括序列、功能类别、突变信息、表型描述、微阵列数据和链接的出版物。这个数据库在研究植物激素调节和激素串扰的几个应用将被介绍和讨论。
Plant hormones are small organic molecules that influence almost every aspect of plant growth and development. Genetic and molecular studies have revealed a large number of genes that are involved in responses to numerous plant hormones, including auxin, gibberellin, cytokinin, abscisic acid, ethylene, jasmonic acid, salicylic acid, and brassinosteroid. Here, we develop an Arabidopsis hormone database, which aims to provide a systematic and comprehensive view of genes participating in plant hormonal regulation, as well as morphological phenotypes controlled by plant hormones. Based on data from mutant studies, transgenic analysis and gene ontology (GO) annotation, we have identified a total of 1026 genes in the Arabidopsis genome that participate in plant hormone functions. Meanwhile, a phenotype ontology is developed to precisely describe myriad hormone-regulated morphological processes with standardized vocabularies. A web interface (http://ahd.cbi.pku.edu.cn) would allow users to quickly get access to information about these hormone-related genes, including sequences, functional category, mutant information, phenotypic description, microarray data and linked publications. Several applications of this database in studying plant hormonal regulation and hormone cross-talk will be presented and discussed.
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拟南芥信息资源（TAIR）：基因结构和功能注释。
影响因子：
14.9
作者：
Swarbreck, David;Wilks, Christopher;Lamesch, Philippe;Berardini, Tanya Z.;Garcia-Hernandez, Margarita;Foerster, Hartmut;Li, Donghui;Meyer, Tom;Muller, Robert;Ploetz, Larry;Radenbaugh, Amie;Singh, Shanker;Swing, Vanessa;Tissier, Christophe;Zhang, Peifen;Huala, Eva
通讯作者：
Huala, Eva
影响因子：
64.5
作者：
Nemhauser, Jennifer L.;Hong, Fangxin;Chory, Joanne
通讯作者：
Chory, Joanne
影响因子：
11.6
作者：
Stepanova, AN;Hoyt, JM;Alonso, JM
通讯作者：
Alonso, JM
影响因子：
7.2
作者：
Kuromori, Takashi;Wada, Takuji;Shinozaki, Kazuo
通讯作者：
Shinozaki, Kazuo
影响因子：
14.9
作者：
Li, Yong;Rosso, Mario G.;Viehoever, Prisca;Weisshaar, Bernd
通讯作者：
Weisshaar, Bernd