Complete genome analysis of two isolates of citrus leaf blotch virus in apple in Henan province of China
Complete genome analysis of two isolates of citrus leaf blotch virus in apple in Henan province of China
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中国河南省苹果两株柑橘叶斑病病毒分离株的全基因组分析
DOI：
10.1007/s40858-021-00451-3
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发表时间：
2021-09
影响因子：
2.5
通讯作者：
Gao Ningning
中科院分区：
文献类型：
--
作者：
Feng Chaohong;Cao Mengji;Li Lijuan;Wang Renrui;Shi Ruijie;Wang Yan;Gao Ningning
病毒检测对于无病毒植物的生产和繁殖、种质交换的检疫和新疾病的发现是必不可少的。利用高通量测序技术首次在河南省中国的苹果园内检测到柑橘叶斑病病毒。鉴定了两个CLBV分离物(CLBV-PY1和CLBV-PY2)，它们的基因组全长分别为8784和8792个核苷酸。两两比对表明，CLBV-PY1与CLBV-PY2的核苷酸序列同源性最高(81.7%)，CLBV-PY2与猕猴桃分离物HZ的核苷酸序列同源性最高(82.9%)。MH427034)。两个分离物的配对比对和系统发育分析表明，这两个分离物与猕猴桃分离物亲缘关系较近。
Virus detection is essential for the production and propagation of virus-free plants, quarantine for germplasm exchange, and discovery of new diseases. Citrus leaf blotch virus (CLBV) was first time detected, using high-throughput sequencing (HTS), in apple commercial orchards in the Henan province of China. Two isolates of CLBV (CLBV-PY1 and CLBV-PY2) were identified, and their full-length genomes are 8784 and 8792 nucleotides, respectively. Pairwise alignment revealed that CLBV-PY1 shared the highest nucleotide sequence identity (81.7%) with CLBV-PY2 and CLBV-PY2 had the highest nucleotide sequence identity (82.9%) with the Actinidia isolate HZ (accession No. MH427034). Results from both pairwise alignment and phylogenetic analysis demonstrated that these two isolates were closely related to the Actinidia isolates.
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DOI：
10.3390/v10080436
发表时间：
2018-08-17
期刊：
Viruses
影响因子：
--
作者：
Maliogka VI;Minafra A;Saldarelli P;Ruiz-García AB;Glasa M;Katis N;Olmos A
通讯作者：
Olmos A
影响因子：
2.2
作者：
M. Guardo;O. Potere;M. Castellano;V. Savino;A. Caruso
通讯作者：
M. Guardo;O. Potere;M. Castellano;V. Savino;A. Caruso
影响因子：
4.5
作者：
Jian Wang;D. Zhu;Y. Tan;X. Zong;H. Wei;Qingzhong Liu
通讯作者：
Jian Wang;D. Zhu;Y. Tan;X. Zong;H. Wei;Qingzhong Liu
中国柑橘四种柑橘叶斑病病毒分离株的全基因组序列
影响因子：
4.8
作者：
Ping Li;Min Li;Song Zhang;Jun Wang;Fangyun Yang;Mengji Cao;Changyong Zhou
通讯作者：
Changyong Zhou
DOI：
--
发表时间：
2016
期刊：
--
影响因子：
--
作者：
M. Grabherr;B. Haas;M. Yassour;J. Levin;Dawn A Thompson;I. Amit;Xian Adiconis;Lin Fan;R. Raychowdhu
通讯作者：
M. Grabherr;B. Haas;M. Yassour;J. Levin;Dawn A Thompson;I. Amit;Xian Adiconis;Lin Fan;R. Raychowdhu