Dalliance: interactive genome viewing on the web.

Dalliance: interactive genome viewing on the web.
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DOI:
10.1093/bioinformatics/btr020
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发表时间:
2011-03-15
期刊:
Bioinformatics (Oxford, England)
影响因子:
--
通讯作者:
Hubbard TJ
Hubbard TJ
中科院分区:
其他
文献类型:
--
作者:
Down TA;Piipari M;Hubbard TJ

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摘要:Dalliance是一个新的基因组查看器,它提供了一个高水平的交互性,而在一个网络浏览器内运行。所有数据都是使用已建立的分布式注释系统(DAS)协议获取的,这使得自定义浏览器和添加额外数据变得容易。可用性和实现:Dalliance完全在您的web浏览器中运行,并依赖于现有的DAS服务器基础设施。几种哺乳动物基因组的浏览器可在http://www.biodalliance.org/上获得,使用DAS意味着可以将自己的数据添加到这些浏览器中。此外,源代码(Javascript)在BSD许可下可用,并且可以直接安装在您自己的web服务器上并嵌入到其他文档中。联系:thomas@biodalliance.org
Summary: Dalliance is a new genome viewer which offers a high level of interactivity while running within a web browser. All data is fetched using the established distributed annotation system (DAS) protocol, making it easy to customize the browser and add extra data. Availability and Implementation: Dalliance runs entirely within your web browser, and relies on existing DAS server infrastructure. Browsers for several mammalian genomes are available at http://www.biodalliance.org/, and the use of DAS means you can add your own data to these browsers. In addition, the source code (Javascript) is available under the BSD license, and is straightforward to install on your own web server and embed within other documents. Contact: thomas@biodalliance.org
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发表时间: 2009-09-01
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